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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank39Aligned Residues244
% Identity22%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260...... ...270.........280... ......290....
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Query Sequence  ETLKLVERLGAGQFGEVWMGYYNG. HTKVAVKSLKQGSMSPD. . . . . . . AFLAEANLMKQ
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Template Sequence  NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST
Template Known Secondary structure  GG
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   189190.........200.........210.........220.........230.........240........
 
   295....300....... ..310.........320.........330.........340.........350...
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Query Sequence  LQHPRLVRLYAVV. TQEPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGMA
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Template Sequence  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG. . VFSEADMRFYAAEIILGLE
Template Known Secondary structure  S

SSB

TT


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   249250.........260.........270.........280....... ..290.........300......
 
   354.....360.........370.........380.........390.........400.........410...
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Query Sequence  FIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN
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Template Sequence  HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG. . . YMAPEVLQ
Template Known Secondary structure  TT




GGG
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S
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   307..310.........320.........330.........340.........350..... ....360...
 
   414.. ...420.........430.........440... ......450.........460.........470
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Query Sequence  YGT. FTIKSDVWSFGILLTEIVTHGRIPYPG. . MTNPEVIQNLERGYRMVRPDNCPEELY
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Template Sequence  KGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR
Template Known Secondary structure  SS



T.SS
SS
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   364.....370.........380...... ...390.........400.........410.........420..
 
   471........480..... ....490..
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Query Sequence  HLMMLCWKERPEDRP. . . . . TFDYLRS
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Template Sequence  SLLEGLLQRDVNRRLGCLGRGAQEVKE
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   423......430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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