Return to main results Retrieve Phyre Job Id

Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank181Aligned Residues162
% Identity99%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120...
Predicted Secondary structure 




































Query SS confidence 



























































Query Sequence  NLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLE
Query Conservation    
 


        

 
  

 
 
      
        
  
 

 
 
       
Alig confidence 



























































Template Conservation      
          

    

   
      
           
  
   
    


Template Sequence  NLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLE
Template Known Secondary structure 
SS
B


STTB

B
TT



BTTSSS

GGG
S
ST
Template Predicted Secondary structure 


































Template SS confidence 



























































   64.....70.........80.........90.........100.........110.........120...
 
   124.....130.........140.........150.........160.........170.........180...
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKI
Query Conservation     

 
 


 


  
       
 



 
    
 
 


          


  
Alig confidence 



























































Template Conservation     

 
 


 


  

      
 



 
      
 


          
     
Template Sequence  PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKI
Template Known Secondary structure  TSTTB
SS

TSSS

TT
SSSTT

SSS
Template Predicted Secondary structure 



























Template SS confidence 



























































   124.....130.........140.........150.........160.........170.........180...
 
   184.....190.........200.........210.........220.....
Predicted Secondary structure 


























Query SS confidence 









































Query Sequence  RNLDNGGFYISPRITFPGLHDLVRHYTNASDGLCTKLSRPCQ
Query Conservation       
   
     
 

  

  
     

   
  
  
Alig confidence 









































Template Conservation                 
 

  

  
      
   
  

 
Template Sequence  RNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQ
Template Known Secondary structure 
TTS
SSTT

BSS

SSSSS




Template Predicted Secondary structure 





















Template SS confidence 









































   184.....190.........200.........210.........220.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D