Job Description Q9JK95 Confidence 4.15% Date Wed Jul 10 14:03:56 BST 2013 Rank 67 Aligned Residues 153 % Identity 12% Template d1xmea1 SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 2.30

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	C	R	W	I	L	P	L	L	L	L	S	A	I	A	F	D	I	I	A	L	A	G	R	G	W	L	Q	S	S	N	H	I	Q	T	S	S	L	W	W	R	C	F	D	E	G	G	G	S	G	S	Y	D	D	G	C	Q	S	L
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	L	M	W	L	S	W	W	M	A	F	I	G	L	V	V	A	A	L	P	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	A	T	V	L	Y	T	F	Y	P	P	L
Template Known Secondary structure																									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S			S	T	T	T	T		T	T	B
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																								.	.	.	130	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		M	E	Y	A	W	G	R	A	A	A	A	T	L	F	C	G	F	I	I	L	C	I	C	F	I	L	S	F	F	A	L	C	G	P	Q	M	L	V	.	.	.	.	.	.	.	F	L	R	V	I	G	G	L	L	A	L	A	A	I	F
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	H	W	A	F	Y	L	G	A	S	V	F	V	L	S	T	W	V	S	I	Y	I	V	L	D	L	W	R	R	W	K	A	A	N	P	G	K	V	T	P	L	V	T	Y	M	A	V	V	F	W	L	M	W	F	L	A	S	L	G
Template Known Secondary structure																																			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	I	S	L	V	I	Y	P	V	K	Y	T	Q	T	F	R	L	H	D	N	P	A	V	N	Y	I	Y	N	W	A	Y	G	F	G	W	A	A	T	I	I	L	I	G	C	S	F	F	F	C	C	L	P	N	Y	E	D	D	L	L
Query Conservation
Alig confidence																																																									.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		L	V	L	E	A	V	L	F	L	L	P	W	S	F	G	L	V	E	G	V	D	P	L	V	A	R	T	L	F	W	W	T	G	H	P	I	V	Y	F	W	L	L	P	A	Y	A	I	I	Y	T	I	L	P	K	Q	.	.	.	.	.
Template Known Secondary structure									T							T	S		S																T																	T					.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		182	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	K	P	R	Y	F	Y
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	G	G	K	L	V	S	D
Template Known Secondary structure		.		T	S		B	S
Template Predicted Secondary structure		.
Template SS confidence
			255	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D