Job Description Q9JK95 Confidence 3.63% Date Wed Jul 10 14:03:56 BST 2013 Rank 82 Aligned Residues 161 % Identity 16% Template d1v54a_ SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 1.80

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		L	A	C	E	R	C	R	W	I	L	P	L	L	L	L	S	A	I	A	F	D	I	I	A	L	.	.	.	.	.	A	G	R	G	W	L	Q	S	S	N	H	I	Q	T	S	S	L	W	W	R	C	F	D	E	G	G	G	S	G	S
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	F	P	R	M	N	N	M	S	F	W	L	L	P	P	S	F	L	L	L	L	A	S	S	M	V	E	A	G	A	G	T	G	W	T	V	Y	P	P	L	A	G	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S										T														S	T	T				S	T	T	T	T		T	T	T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		Y	D	D	G	C	Q	S	L	M	E	Y	A	W	G	R	A	A	A	A	T	L	F	C	G	F	I	I	L	C	I	C	F	I	L	S	F	F	A	L	C	G	P	Q	.	M	L	V	F	L	R	V	I	G	G	L	L	A	L	A	A
Query Conservation																																													.
Alig confidence		.	.	.	.																																								.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	H	A	G	A	S	V	D	L	T	I	F	S	L	H	L	A	G	V	S	S	I	L	G	A	I	N	F	I	T	T	I	I	N	M	K	P	P	A	M	S	Q	Y	Q	T	P	L	F	V	W	S	V	M	I	T	A
Template Known Secondary structure		.	.	.	.	T	T		S	S																														S	S		T	T			G	G	G	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150													.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	Q	I	I	S	L	V	I	Y	P	V	K	Y	T	Q	T	F	R	L	H	D	N	P	A	V	N	Y	I	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	W	A	Y	G	F	G	W	A	A	T	I	I	L	I	G	C	S
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	L	L	L	S	L	P	V	L	A	A	G	I	T	M	L	L	T	D	R	N	L	N	T	T	F	F	D	P	A	G	G	G	D	P	I	L	Y	Q	H	L	F	W	F	F	G	H	P	E	V	Y	I	L	I	L	P	G	F	G
Template Known Secondary structure																								S				S	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	F	C	C	L	P	N	Y	E	D	D	L	L	G	A	A	K	P	R	Y	F	Y
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		M	I	S	H	I	V	T	Y	Y	.	.	.	.	.	S	G	K	K	E	P	F	G	Y
Template Known Secondary structure											.	.	.	.	.	T	T		S	S		T	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D