Job Description Q9JK95 Confidence 3.52% Date Wed Jul 10 14:03:56 BST 2013 Rank 88 Aligned Residues 161 % Identity 19% Template d1ar1a_ SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 2.70

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30											.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		R	C	G	L	A	C	E	R	C	R	W	I	L	P	L	L	L	L	S	A	I	A	F	D	I	I	A	L	.	.	.	.	.	.	.	.	.	.	A	G	R	G	W	L	Q	S	S	N	H	I	Q	T	S	S	L	W	W	R	C	F
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		A	P	D	M	A	F	P	R	L	N	N	L	S	Y	W	M	Y	V	C	G	V	A	L	G	V	A	S	L	L	A	P	G	G	N	D	Q	M	G	S	G	V	G	W	V	L	Y	P	P	L	S	T	T	E	A	.	.	.	.	.	.
Template Known Secondary structure			S	S		S																									S			T	T	T			S			S	T	T	T	T		T	T	T	G	G	G		S	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		D	E	G	G	G	S	G	S	Y	D	D	G	C	Q	S	L	M	E	Y	A	W	G	R	A	A	A	A	T	L	F	C	G	F	I	I	L	C	I	C	F	I	L	S	F	F	A	L	C	G	P	Q	.	M	L	V	F	L	R	V	I
Query Conservation																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	S	M	D	L	A	I	F	A	V	H	V	S	G	A	S	S	I	L	G	A	I	N	I	I	T	T	F	L	N	M	R	A	P	G	M	T	L	F	K	V	P	L	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																													S	S			T	T			G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150													.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	L	A	L	A	A	I	F	Q	I	I	S	L	V	I	Y	P	V	K	Y	T	Q	T	F	R	L	H	D	N	P	A	V	N	Y	I	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	W	A	Y	G	F	G	W	A	A
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	W	S	V	F	I	T	A	W	L	I	L	L	S	L	P	V	L	A	G	A	I	T	M	L	L	M	D	R	N	F	G	T	Q	F	F	D	P	A	G	G	G	D	P	V	L	Y	Q	H	I	L	W	F	F	G	H	P	E	V	Y
Template Known Secondary structure																																S				T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	I	L	I	G	C	S	F	F	F	C	C	L	P	N	Y	E	D	D	L	L	G	A	A	K	P	R	Y	F	Y
Query Conservation
Alig confidence																			.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		I	I	I	L	P	G	F	G	I	I	S	H	V	I	S	T	F	.	.	.	.	.	.	A	K	K	P	I	F	G	Y
Template Known Secondary structure																			.	.	.	.	.	.		T	S			T	T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D