Job Description Q9JK95 Confidence 7.95% Date Wed Jul 10 14:03:56 BST 2013 Rank 16 Aligned Residues 113 % Identity 18% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å Model Dimensions (Å) X:56.249 Y:68.089 Z:32.314

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		L	M	E	Y	A	W	G	R	A	A	A	A	T	L	F	C	G	F	I	I	L	C	I	C	F	I	L	S	F	F	A	L	C	G	P	Q	.	.	.	.	.	.	M	L	V	F	L	R	V	I	G	G	L	L	A	L	A	A	I	F
Query Conservation																																						.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L
Template Known Secondary structure			T	T											T																			S	S	T	T						T	T		S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		Q	I	I	S	L	V	I	Y	P	V	K	Y	T	Q	T	F	R	L	H	D	N	P	A	V	.	.	.	.	.	N	Y	I	Y	N	W	A	Y	G	F	G	W	A	A	T	I	I	L	I	G	C	S	F	F	F	C	C	L	P	N	Y
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.
Template Conservation
Template Sequence		V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A
Template Known Secondary structure									T	T	S																				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		177	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	V	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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