Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JK95
Confidence5.59%DateWed Jul 10 14:03:56 BST 2013
Rank36Aligned Residues8
% Identity38%Templatec1q0wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:vacuolar protein sorting-associated protein PDBTitle: solution structure of vps27 amino-terminal uim-ubiquitin2 complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   174.....180.
Predicted Secondary structure 



Query SS confidence 







Query Sequence  PNYEDDLL
Query Conservation     
    
Alig confidence 







Template Conservation 







Template Sequence  PEDEEELI
Template Known Secondary structure 

Template Predicted Secondary structure 


Template SS confidence 







   256...260...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D