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Job DescriptionQ91X43
Confidence99.70%DateWed Jul 10 14:34:37 BST 2013
Rank104Aligned Residues61
% Identity31%Templatec2js0A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of second sh3 domain of adaptor nck
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   728.730.........740.........750.........760.........770.........780.......
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Query Sequence  IPKGRKVKALYDFLGENEDELSFKAGDVITELEPIDDAWMRGELMGRAGMFPKNYVQFLQ
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Template Sequence  GSLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEG
Template Known Secondary structure 

SS
S
B


STTB

B
TT

SSSTTGGGSS
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   1........10.........20.........30.........40.........50.........60
 
   788
Predicted Secondary structure 
Query SS confidence 
Query Sequence  V
Query Conservation   
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Template Sequence  D
Template Known Secondary structure 
Template Predicted Secondary structure 
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   61
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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