Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.70%DateTue Jul 30 13:06:17 BST 2013
Rank35Aligned Residues112
% Identity14%Templated1h2tz_
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170...... ...180.........190
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Query Sequence  RNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLCCYL
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Template Sequence  KSCTLYVGNLSFYTTEEQIYELFSKSGDIKK. . . . . . . . IIMGLDKMKKTACGFCFVEYY
Template Known Secondary structure  T

S

TT

GGGS
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TTT
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   38.40.........50.........60........ .70.........80.........
 
   191........200.........210.........220.........230.........240.........250
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Query Sequence  KKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDW
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Template Sequence  SRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDAGRGGY
Template Known Secondary structure  STTTSTT

S


TTTTB

STTSS
GGGGT

S
BGGGTB
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   90.........100.........110.........120.........130.........140.........
 
   251
Predicted Secondary structure 
Query SS confidence 
Query Sequence  R
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  G
Template Known Secondary structure  .
Template Predicted Secondary structure 
Template SS confidence 
   150
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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