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Job DescriptionQ8BGC0
Confidence99.70%DateTue Jul 30 13:06:17 BST 2013
Rank36Aligned Residues90
% Identity19%Templatec3pgwS_
PDB info PDB header:splicing/dna/rnaChain: S: PDB Molecule:u1-70k; PDBTitle: crystal structure of human u1 snrnp
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.........170...... ...
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Query Sequence  AESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQG
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Template Sequence  DPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR. . . . . . . . IHMVYSKRSG
Template Known Secondary structure  SGGGTTSSS

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   90.........100.........110.........120.........130. ........140.
 
   180.........190.........200.........210........
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Query Sequence  NLKGDGLCCYLKKESVELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
Template Known Secondary structure  S

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   142.......150.........160.........170.........180
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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