Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence96.24%DateTue Jul 30 13:06:17 BST 2013
Rank234Aligned Residues78
% Identity22%Templated1uw4a_
SCOP infoFerredoxin-like RNA-binding domain, RBD Smg-4/UPF3
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.. .......
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Query Sequence  TNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLK. . . . GDGLCCY
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Template Sequence  SKVVIRRLPPTLTKEQLQEHLQPMPEHD. . . . . . . . . YFEFFSNDTSLYPHMYARAYINF
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   51........60.........70........ .80.........90.........100.
 
   190.........200......... 210.........220
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Query Sequence  LKKESVELALKLLDEDEIRG. . . . . YKLHVEVAKFQ
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Template Sequence  KNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQ
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   102.......110.........120.........130.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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