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Job DescriptionQ8BGC0
Confidence99.64%DateTue Jul 30 13:06:17 BST 2013
Rank56Aligned Residues102
% Identity23%Templatec2d9pA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:polyadenylate-binding protein 3; PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.........160.........170.........
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Query Sequence  KAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQG
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Template Sequence  SSGSSGDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTIT. . . . . . . . SAKVMME. GG
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   280.........290.........300.........310.........320. ....... .330
 
   180.........190.........200.........210.........220.........230
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Query Sequence  NLKGDGLCCYLKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKK
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Template Sequence  RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQSGPSSG
Template Known Secondary structure  SSSTT
BSSSSB

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   331........340.........350.........360.........370.........380.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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