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Job Description | Q8BGC0 | Confidence | 99.58% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 120 | Aligned Residues | 89 |
% Identity | 20% | Template | d2cpha1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
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Resolution | UNK |
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128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | K | K | Q | T | T | S | K | I | L | V | R | N | I | P | F | Q | A | N | Q | R | E | I | R | E | L | F | S | T | F | G | E | L | K | T | . |
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V | R | L | P | K | K | M | T | G | T | G | A | H | R | G | F | G | F | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | |
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. | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . |
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188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | Y | L | K | K | E | S | V | E | L | A | L | K | L | L | . |
D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | F | I | T | K | Q | D | A | K | K | A | F | N | A | L | C | H | S | T | H | L | Y | G | R | R | L | V | L | E | W | A | D | S | E | V | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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