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Job DescriptionQ8BGC0
Confidence99.83%DateTue Jul 30 13:06:17 BST 2013
Rank13Aligned Residues162
% Identity20%Templatec1rkjA_
PDB info PDB header:transcription/rnaChain: A: PDB Molecule:nucleolin; PDBTitle: solution structure of the complex formed by the two n-2 terminal rna-binding domains of nucleolin and a pre-rrna3 target
ResolutionUNK
Model Dimensions (Å)X:53.034 Y:76.040 Z:29.637

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180........
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Query Sequence  EEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCC
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Template Sequence  ESTTPFNLFIGNLNPNKSVAELKVAISELFAKND. . . . . . . . LAVVDVRTGTNRKFGYVD
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   910.........20.........30.........40.. .......50.........60
 
   189190.........200.........210.........220.........230.........240........
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Query Sequence  YLKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQL
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Template Sequence  FESAEDLEKALELTGLKVFGNEIKLEKPKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   61........70.........80.........90
 
   249250.........260.........270.........280.........290.........300........
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Query Sequence  DWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF
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Template Sequence  . . . . . . . RDSKKVRAARTLLAKNL. . . . . . . . . . . SFNITEDELKEVFEDALEIRLVSQ.
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   91........100....... ..110.........120.........130.
 
   309310.........320.........330.........340.......
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Query Sequence  DRHPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQA
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Template Sequence  DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY
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   132.......140.........150.........160.........170
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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