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Job Description | Q8BGC0 | Confidence | 99.58% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 110 | Aligned Residues | 82 |
% Identity | 22% | Template | d2cqca1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
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Resolution | UNK |
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125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
. | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
W | F | H | V | E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | . |
D | Q | G | N | L | K | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | N | R | A | N | P | D | P | N | C | C | L | G | V | F | G | L | S | L | Y | T | T | E | R | D | L | R | E | V | F | S | K | Y | G | P | I | A | D | . |
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V | S | I | V | Y | D | Q | Q | S | R | R | S | R | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
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. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
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184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | G | L | C | C | Y | L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | A | F | V | Y | F | E | N | V | D | D | A | K | E | A | K | E | R | A | N | G | M | E | L | D | G | R | R | I | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  | T | T |  |  |  | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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