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Job DescriptionQ8BGC0
Confidence99.93%DateTue Jul 30 13:06:17 BST 2013
Rank5Aligned Residues189
% Identity20%Templatec1qm9A_
PDB info PDB header:ribonucleoproteinChain: A: PDB Molecule:polypyrimidine tract-binding protein; PDBTitle: nmr, representative structure
ResolutionUNK
Model Dimensions (Å)X:67.099 Y:53.973 Z:41.784

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140. ........150.........160.........170.........180.........190.
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Query Sequence  NTNVYVSGL. PPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLK
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Template Sequence  NSVLLVSNLNPERVTPQSLFILFGVYGDVQR. . . . . . . . VKILFN. . . . KKENALVQMAD
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   3......10.........20.........30... ...... 40.........50
 
   192.......200.........210.........220.........230.........240.........250.
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Query Sequence  KESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDWR
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Template Sequence  GNQAQLAMSHLNGHKLHGKPIRITLSK. . . HQNVQLPREGQEDQGLTKDYGNSPLHRFKK
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   51........60.........70....... ..80.........90.........100.......
 
   252.......260.........270.........280.........290.........300.........310.
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Query Sequence  PERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH
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Template Sequence  PGSKNFQNIFPPSATLHLSNI. . . . . . . . . . . PPSVSEEDLKVLFSSNGGVVKGFKFFQK
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   108.110.........120........ .130.........140.........150......
 
   312.......320.........330...... ...340.......
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Query Sequence  PDGVASVSFREPEEADHCIQTLDGR. WFGGRQITAQA
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Template Sequence  DRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF
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   157..160.........170.........180.........190...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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