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Job Description | Q8BGC0 | Confidence | 99.64% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 52 | Aligned Residues | 81 |
% Identity | 19% | Template | d1l3ka1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
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Resolution | 1.10 |
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129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | . |
D | Q | G | N | L | K | G | D | G | L | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | P | E | Q | L | R | K | L | F | I | G | G | L | S | F | E | T | T | D | E | S | L | R | S | H | F | E | Q | W | G | T | L | T | D | . |
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C | V | V | M | R | D | P | N | T | K | R | S | R | G | F | G | F | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
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188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | Y | L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | Y | A | T | V | E | E | V | D | A | A | M | N | . |
A | R | P | H | K | V | D | G | R | V | V | E | P | K | R | A | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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