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Job Description | Q8BGC0 | Confidence | 99.57% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 126 | Aligned Residues | 90 |
% Identity | 18% | Template | c2lmiA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:g-rich sequence factor 1; |
PDBTitle: nmr structure of the protein bc040485 from homo sapiens
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Resolution | UNK |
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123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | G | W | F | H | V | E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | S | K | L | E | E | E | V | D | D | V | F | L | I | R | A | Q | G | L | P | W | S | C | T | M | E | D | V | L | N | F | F | S | D | C | R | I | R | N | G | E | N | . |
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G | I | H | F | L | L | N | R | D | G | K | R | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . |
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183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | D | G | L | C | C | Y | L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | D | A | L | I | E | M | E | S | E | Q | D | V | Q | K | A | L | E | . |
K | H | R | M | Y | M | G | Q | R | Y | V | E | V | Y | E | I | N |
Template Known Secondary structure |   |
S |  |  |  |  |  | B | S | S |  |  |  |  |  |  |  |  | T | . | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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