Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.64%DateTue Jul 30 13:06:17 BST 2013
Rank57Aligned Residues86
% Identity26%Templated1x5ua1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170...... ...180.......
Predicted Secondary structure 























.





Query SS confidence 















































.










Query Sequence  EEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLC
Query Conservation       
 


  

 
 
  
    
   
 
           
   
.  
  

   
Alig confidence 

































........





.










Template Conservation         
 
 


   

  
   
   
    ........               


Template Sequence  ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVN. . . . . . . . THMPKDRVTGQHQGYGFV
Template Known Secondary structure 


TTT


TT

TTS
........

B
SSS
SB
S
Template Predicted Secondary structure 




















........

















Template SS confidence 



























































   11........20.........30.........40.... .....50.........60..
 
   188.190.........200.........210.........220..
Predicted Secondary structure 












Query SS confidence 


































Query Sequence  CYLKKESVELALKLLDEDEIRGYKLHVEVAKFQLK
Query Conservation   
   

   

  
         
 
  
 
   
Alig confidence 


































Template Conservation   
     
  
   
      

 
 
  
     
Template Sequence  EFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNK
Template Known Secondary structure  SSSSS
B
SS
B
TTTTS
Template Predicted Secondary structure 














Template SS confidence 


































   63......70.........80.........90.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D