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Job Description | Q8BGC0 | Confidence | 99.33% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 215 | Aligned Residues | 71 |
% Identity | 21% | Template | c1wwhB_ |
PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:nucleoporin 35; |
PDBTitle: crystal structure of the mppn domain of mouse nup35
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Resolution | 2.70 Å |
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133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | T | W | V | T | V | F | G | F | P | Q | A | S | A | . |
S | Y | I | L | L | Q | F | A | Q | Y | G | N | I | L | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
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193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | . |
K | L | H | V | E | V | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | Q | A | R | K | A | L | S | . |
K | D | G | R | I | F | G | E | S | I | M | I | G | V | K | P | C | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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218 | . | 220 | . | . | . | . | . | |
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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