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Job Description | Q8BGC0 | Confidence | 99.58% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 113 | Aligned Residues | 76 |
% Identity | 16% | Template | c3md1B_ |
PDB info |
PDB header:rna binding protein | Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein |
PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1)
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Resolution | 1.60 Å |
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134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | N | L | F | V | G | D | L | N | V | N | V | D | D | E | T | L | R | N | A | F | K | D | F | P | S | Y | L | S | . |
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G | H | V | M | W | D | M | Q | T | G | S | S | R | G | Y | G | F | V | S | F | T | S | Q |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
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193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | D | A | Q | N | A | M | D | S | M | Q | G | Q | D | L | N | G | R | P | L | R | I | N | W | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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