Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.76%DateTue Jul 30 13:06:17 BST 2013
Rank23Aligned Residues84
% Identity35%Templatec2dnyA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:fuse-binding protein-interacting repressor, PDBTitle: solution structure of the third rna binding domain of fbp-2 interacting repressor, siahbp1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300....... ..310.
Predicted Secondary structure 













........


Query SS confidence 















































. . . . . . . .



Query Sequence  RLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLL. . . . . . . . FDRH
Query Conservation         
   
 
                 

       
 
  
 
........    
Alig confidence 




















......




















........



Template Conservation     

 

 
 

        ......    

 
     
 
  
 
            
Template Sequence  RKQESTVMVLRNMVDPKDIDD. . . . . . DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE
Template Known Secondary structure 





SSS
TTT

......TTTS


SSTT

Template Predicted Secondary structure 









......














Template SS confidence 



























































   440.........450.........460 .........470.........480.........490...
 
   312.......320.........330.........340.........
Predicted Secondary structure 










Query SS confidence 





































Query Sequence  PDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQAWD
Query Conservation    
   
 
     
   
   


 
 

 
 
   
Alig confidence 





































Template Conservation    
 


 
   
 
  
   


  
 

 
 
 
  
Template Sequence  IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYD
Template Known Secondary structure  SSTT
TT


Template Predicted Secondary structure 









Template SS confidence 





































   494.....500.........510.........520.........530.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D