Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.61%DateTue Jul 30 13:06:17 BST 2013
Rank78Aligned Residues78
% Identity22%Templatec3q2tC_
PDB info PDB header:rna binding protein/rnaChain: C: PDB Molecule:cleavage and polyadenylation specificity factor subunit 6; PDBTitle: crystal structure of cfim68 rrm/cfim25/rna complex
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170...... ...180.........190...
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Query Sequence  NVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLCCYLKKE
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Template Sequence  ALYIGNLTWWTTDEDLTEAVHSLGVNDILE. . . . . . IKFFENRANGQSKGFALVGVGSEA
Template Known Secondary structure  S

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GGGT



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   82.......90.........100.........110. ........120.........130.....
 
   194.....200.........210........
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Query Sequence  SVELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  SSKKLMDLLPKRELHGQNPVVTPVN
Template Known Secondary structure  STTS
BTTB



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   136...140.........150.........160
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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