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Job DescriptionQ8BGC0
Confidence99.64%DateTue Jul 30 13:06:17 BST 2013
Rank55Aligned Residues82
% Identity26%Templatec2rneA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170...... ...180.......
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Query Sequence  EEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLC
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Template Sequence  DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISD. . . . . . . . ARVVKDMATGKSKGYGFV
Template Known Secondary structure  S
SSSS

TT

GGG

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S
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   92.......100.........110.........120..... ....130.........140...
 
   188.190.........200.........210........
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Query Sequence  CYLKKESVELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  SFFNKWDAENAIQQMGGQWLGGRQIRTNWAT
Template Known Secondary structure  SSTT
TT
S
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   144.....150.........160.........170....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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