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Job DescriptionQ8BGC0
Confidence99.33%DateTue Jul 30 13:06:17 BST 2013
Rank215Aligned Residues71
% Identity21%Templatec1wwhB_
PDB info PDB header:protein transportChain: B: PDB Molecule:nucleoporin 35; PDBTitle: crystal structure of the mppn domain of mouse nup35
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190..
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Query Sequence  NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKK
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Template Sequence  DTWVTVFGFPQASA. SYILLQFAQYGNIL. . . . . . . . KHVM. . . . . SNTGNWMHIRYQSK
Template Known Secondary structure  TT


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   172.......180..... ....190......... 200... ......210.......
 
   193......200.........210 ........
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Query Sequence  ESVELALKLLDEDEIRGY. KLHVEVAK
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Template Sequence  LQARKALS. KDGRIFGESIMIGVKPCI
Template Known Secondary structure  T.TTT
TTT


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   218.220..... ....230.........240...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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