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Job Description | Q8BGC0 | Confidence | 99.41% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 205 | Aligned Residues | 76 |
% Identity | 17% | Template | c2hgnA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; |
PDBTitle: nmr structure of the third qrrm domain of human hnrnp f
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Resolution | UNK |
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133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | K |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | H | C | V | H | M | R | G | L | P | Y | K | A | T | E | N | D | I | Y | N | F | F | S | P | L | N | P | V | R | . |
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V | H | I | E | I | G | P | D | G | R | V | T | G | E | A | D | V | E | F | A | T | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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288 | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
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. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
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193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | E | A | V | A | A | M | S | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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339 | 340 | . | . | . | . | . | . | |
. | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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