Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.41%DateTue Jul 30 13:06:17 BST 2013
Rank206Aligned Residues72
% Identity22%Templatec2krbA_
PDB info PDB header:translationChain: A: PDB Molecule:eukaryotic translation initiation factor 3 PDBTitle: solution structure of eif3b-rrm bound to eif3j peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140... ......150.........160.........170.........180.......
Predicted Secondary structure 





......


















Query SS confidence 









. . . . . .











































Query Sequence  TNVYVSGLPP. . . . . . DITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLC
Query Conservation 
 


  

 ......
 
  
    
   
 
           
   
  
  

   
Alig confidence 









......


















........





.









Template Conservation    
 
 


          
  
   
   
 
  ........  
   .     
  

Template Sequence  SVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITN. . . . . . . . DFYPEE. DGKTKGYIFL
Template Known Secondary structure 
S




TTTTT

........


B.TTB


Template Predicted Secondary structure 











........


.





Template SS confidence 



























































   16...20.........30.........40.........50 ...... ...60......
 
   188.190.........200......... 210....
Predicted Secondary structure 








.
Query SS confidence 





















.




Query Sequence  CYLKKESVELALKLLDEDEIRG. YKLHV
Query Conservation   
   

   

  
       .  
 
Alig confidence 





















.




Template Conservation   
     
  

  


  
     
 
Template Sequence  EYASPAHAVDAVKNADGYKLDKQHTFRV
Template Known Secondary structure  SSTTSSS


SSSS



Template Predicted Secondary structure 








Template SS confidence 



























   67..70.........80.........90....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D