Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.51%DateTue Jul 30 13:06:17 BST 2013
Rank165Aligned Residues84
% Identity20%Templatec2db1A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein f homolog
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  VEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLC
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Template Sequence  PEGGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVA. . . . . GVHFIYTREGRQSGEAFV
Template Known Secondary structure  S
B



S

TT

TTTS
BTTGGG.....G
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   5....10.........20.........30.........40. ........50.........
 
   188.190.........200.........210.......
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Query Sequence  CYLKKESVELALKLLDEDEIRGYKLHVEVA
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Template Sequence  ELESEDDVKLALK. KDRESMGHRYIEVFKS
Template Known Secondary structure  BSSGG.GTTTT
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   60.........70.. .......80........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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