Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.60%DateTue Jul 30 13:06:17 BST 2013
Rank89Aligned Residues86
% Identity21%Templatec2kxnB_
PDB info PDB header:rna binding protein/rnaChain: B: PDB Molecule:transformer-2 protein homolog beta; PDBTitle: nmr structure of human tra2beta1 rrm in complex with aagaac rna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170...... ...180.......
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Query Sequence  EEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLC
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Template Sequence  NPDPNCCLGVFGLSLYTTERDLREVFSKYGPIAD. . . . . . . . VSIVYDQQSRRSRGFAFV
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   113......120.........130.........140...... ...150.........160....
 
   188.190.........200.........210.........220..
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Query Sequence  CYLKKESVELALKLLDEDEIRGYKLHVEVAKFQLK
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Template Sequence  YFENVDDAKEAKERANGMELDGRRIRVDFSITKRP
Template Known Secondary structure  S
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   165....170.........180.........190.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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