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Job DescriptionQ8BGC0
Confidence99.96%DateTue Jul 30 13:06:17 BST 2013
Rank1Aligned Residues199
% Identity16%Templatec2ghpC_
PDB info PDB header:rna binding proteinChain: C: PDB Molecule:u4/u6 snrna-associated splicing factor prp24; PDBTitle: crystal structure of the n-terminal 3 rna binding domains of the yeast2 splicing factor prp24
Resolution2.70 Å
Model Dimensions (Å)X:79.497 Y:49.530 Z:36.683

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190...
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Query Sequence  TNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKKE
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Template Sequence  TTVLVKNLPKSYNQNKVYKYFKHCGPII. . . . . . . . HVDVADS. LKKNFRFARIEFARYD
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   41........50.........60........ .70..... ....80.........90.
 
   194.....200.........210......... 220...
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Query Sequence  SVELALKLLDEDEIRGYKLHVEVAKF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QLKG
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Template Sequence  GALAAITKTHKVVGQNEIIVSHLTECTLWXTNFPPSYTQRNIRDLLQDINVVALSIRLPR
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   92.......100.........110.........120.........130.........140.........150.
 
   224.....230.........240.........250.........260.........270.........280...
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Query Sequence  EYDASKKKKKCKDYKKKLSLQQKQLDWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPL
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Template Sequence  RFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNPLTLEGREIXIRNLSTELLDE. . .
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   159160.........170.........180.........190.........200.........210.....
 
   284.....290.........300........ .310.........320.........330.........340.
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Query Sequence  VLNEIREDLRVECSKFGQIRKLLLF. . DRHPDGVASVSFREPEEADHCIQTLDGRWFGGR
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Template Sequence  . . . . . . NLLRESFEGFGSIEKINIPAGQKFNNCCAFXVFENKDSAERALQ. XNRSLLGNR
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   225....230.........240.........250.........260........ .270.......
 
   342.......350.
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Query Sequence  QITAQAWDGT
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Template Sequence  EISVSLADKK
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   281........290
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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