Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.49%DateTue Jul 30 13:06:17 BST 2013
Rank182Aligned Residues73
% Identity27%Templatec2adbA_
PDB info PDB header:rna binding protein/rnaChain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190....
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Query Sequence  NVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKKES
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Template Sequence  RIIVENLFYPVTLDVLHQIFSKFGTVL. . . . . . . . KIITFT. . . KNNQFQALLQYADPVS
Template Known Secondary structure  S
S

STTTTTS
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   185....190.........200.........210. ...... ..220.........230...
 
   195....200....... ..210........
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Query Sequence  VELALKLLDEDEI. . RGYKLHVEVAK
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Template Sequence  AQHAKLSLDGQNIYNACCTLRIDFSK
Template Known Secondary structure  S

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S
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   234.....240.........250.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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