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Job Description | Q8BGC0 | Confidence | 99.60% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 93 | Aligned Residues | 76 |
% Identity | 22% | Template | c3p6yD_ |
PDB info |
PDB header:rna binding protein/rna | Chain: D: PDB Molecule:cleavage and polyadenylation specificity factor subunit 6; |
PDBTitle: cf im25-cf im68-uguaa complex
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Resolution | 2.90 Å |
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135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
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Query Sequence |   |
N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | . |
D | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | K | E |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | L | Y | I | G | N | L | T | W | W | T | T | D | E | D | L | T | E | A | V | H | S | L | G | V | N | D | I | L | E | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
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194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | S | K | K | L | M | D | L | L | P | K | R | E | L | H | G | Q | N | P | V | V | T | P | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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