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Job Description | Q8BGC0 | Confidence | 99.71% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 34 | Aligned Residues | 95 |
% Identity | 14% | Template | c2do0A_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; |
PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m
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Resolution | UNK |
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131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C | C | Y | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | L | G | S | T | V | F | V | A | N | L | D | Y | K | V | G | W | K | K | L | K | E | V | F | S | M | A | G | V | V | V | . |
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R | A | D | I | L | E | D | K | D | G | K | S | R | G | I | G | T | V | T | F | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
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. | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
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191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K | G | E | Y | D | A | S | K | K | K | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | S | I | E | A | V | Q | A | I | S | M | F | N | G | Q | L | L | F | D | R | P | M | H | V | K | M | D | E | R | A | L | P | K | G | D | F | F | P | P | E | R | P | Q |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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