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Job Description | Q8BGC0 | Confidence | 99.64% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 56 | Aligned Residues | 102 |
% Identity | 23% | Template | c2d9pA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:polyadenylate-binding protein 3; |
PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3
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Resolution | UNK |
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120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | A | E | S | G | W | F | H | V | E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | S | G | S | S | G | D | R | I | T | R | Y | Q | V | V | N | L | Y | V | K | N | L | D | D | G | I | D | D | E | R | L | R | K | A | F | S | P | F | G | T | I | T | . |
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S | A | K | V | M | M | E | . |
G | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
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. | 330 |
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180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | L | K | G | D | G | L | C | C | Y | L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K | G | E | Y | D | A | S | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | S | K | G | F | G | F | V | C | F | S | S | P | E | E | A | T | K | A | V | T | E | M | N | G | R | I | V | A | T | K | P | L | Y | V | A | L | A | Q | R | K | E | E | R | Q | S | G | P | S | S | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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