Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.75%DateTue Jul 30 13:06:17 BST 2013
Rank25Aligned Residues105
% Identity22%Templatec2lcwA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:rna-binding protein fus; PDBTitle: solution structure of fus/tls rrm domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170...... ...180.....
Predicted Secondary structure 

























.





Query SS confidence 

















































.








Query Sequence  HVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDG
Query Conservation         
 


  

 
 
  
    
   
 
           
   
.  
  

  
Alig confidence 

















































.








Template Conservation 
        
 
 


   
   
   
   
                         
 
Template Sequence  EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA
Template Known Secondary structure 

S
SS
S



S


SSSSS
B
B
TTTSSB

SSSS
Template Predicted Secondary structure 
































Template SS confidence 



























































   278.280.........290.........300.........310.........320.........330.......
 
   186...190.........200.........210.........220.........230.
Predicted Secondary structure 





















Query SS confidence 













































Query Sequence  LCCYLKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKK
Query Conservation   
 
   

   

  
         
 
  
 
            
Alig confidence 













































Template Conservation 

 
     
  
   


    

 
 
  
             
Template Sequence  TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR
Template Known Secondary structure 
BS
SSS
TT
S




S

S
SSS

Template Predicted Secondary structure 




















Template SS confidence 













































   338.340.........350.........360.........370.........380...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D