Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.71%DateTue Jul 30 13:06:17 BST 2013
Rank34Aligned Residues95
% Identity14%Templatec2do0A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.........180.........190
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Query Sequence  DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYL
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Template Sequence  RLGSTVFVANLDYKVGWKKLKEVFSMAGVVV. . . . . . . . RADILEDKDGKSRGIGTVTFE
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   200.........210.........220.........230 .........240.........250.
 
   191........200.........210.........220.........230...
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Query Sequence  KKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKK
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Template Sequence  QSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQ
Template Known Secondary structure  STT
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   252.......260.........270.........280.........290....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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