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Job DescriptionQ8BGC0
Confidence99.52%DateTue Jul 30 13:06:17 BST 2013
Rank156Aligned Residues85
% Identity24%Templatec2jx2A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:negative elongation factor e; PDBTitle: solution conformation of rna-bound nelf-e rrm
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........
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Query Sequence  EDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCY
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Template Sequence  PRKGNTLYVYGE. . DMTPTLLRGAFSPFGNII. . . . . . . . DLSM. . . . . DPPRNCAFVTY
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B
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   36...40....... ..50.........60..... .... 70.........80
 
   190.........200.........210.........220.........
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Query Sequence  LKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASK
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Template Sequence  EKMESADQAVAELNGTQVESVQLKVNIARKQPMLDAATGK
Template Known Secondary structure  SSTT
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   81........90.........100.........110.........120
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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