Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.80%DateTue Jul 30 13:06:17 BST 2013
Rank18Aligned Residues145
% Identity14%Templatec2f3jA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:rna and export factor binding protein 2; PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155).
ResolutionUNK
Model Dimensions (Å)X:71.141 Y:62.878 Z:59.255

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120.....
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Query Sequence  EDFIATYQANYGFSSDGASSSTANVQDANTKAVEEPPQKEVPETPDSKRKGEKRKAESGW
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Template Sequence  DDIIKLNRNQRRVNRGGGPRRNRPAIARGGRNRPAPYSRPKPLPDKWQHDLFDSGCGGGE
Template Known Secondary structure  T

S
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   10.........20.........30.........40.........50.........60.........
 
   126...130.........140.........150.........160.........170.........180.....
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Query Sequence  FHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDG
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Template Sequence  . . . GVETGAKLLVSNLDFGVSDADIQELFAEFGTLKK. . . . . . . . AAVDYDRSGRSLGTA
Template Known Secondary structure  ...S
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   70.........80.........90.........100... ......110........
 
   186...190.........200.........210.........220.
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Query Sequence  LCCYLKKESVELALKLLDEDEIRGYKLHVEVAKFQL
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Template Sequence  DVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQI
Template Known Secondary structure  S
STT
B
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   119120.........130.........140.........150....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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