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Job Description | Q8BGC0 | Confidence | 96.58% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 232 | Aligned Residues | 75 |
% Identity | 23% | Template | c3p3dA_ |
PDB info |
PDB header:nuclear protein | Chain: A: PDB Molecule:nucleoporin 53; |
PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii
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Resolution | 2.35 Å |
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135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | . |
P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | K | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | I | L | V | F | G | Y | P | E | T | M | . |
A | N | Q | V | I | A | Y | F | Q | E | F | G | T | I | L | E | D | F | E | V | L | R | K | P | F | V | P | I | F | S | G | N | S | . |
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W | T | K | I | T | Y | D | N | P | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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267 | . | . | 270 | . | . | . | . | . | . | . | |
. | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
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. | . | . | . | . | . | . | . | . | 320 |
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194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | A | V | D | A | L | . |
L | E | N | G | A | V | F | N | G | V | L | L | G | V | I | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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332 | . | . | . | . | . | |
. | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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