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Job Description | Q8BGC0 | Confidence | 99.60% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 91 | Aligned Residues | 77 |
% Identity | 16% | Template | c3nnhA_ |
PDB info |
PDB header:rna binding protein/rna | Chain: A: PDB Molecule:cugbp elav-like family member 1; |
PDBTitle: crystal structure of the cugbp1 rrm1 with guuguuuuguuu rna
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Resolution | 2.75 Å |
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133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | I | K | M | F | V | G | Q | V | P | R | T | W | S | E | K | D | L | R | E | L | F | E | Q | Y | G | A | V | Y | E | . |
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I | N | V | L | R | D | R | S | Q | N | P | P | Q | S | K | G | C | C | F | V | T | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
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190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | T | R | K | A | A | L | E | A | Q | N | A | L | H | N | M | K | V | L | P | G | M | H | H | P | I | Q | M | K | P | A |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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