Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.35%DateTue Jul 30 13:06:17 BST 2013
Rank213Aligned Residues73
% Identity18%Templatec3r27A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of the first rrm domain of heterogeneous nuclear2 ribonucleoprotein l (hnrnp l)
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190..
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Query Sequence  NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKK
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Template Sequence  SPVVHIRGLIDGVVEADLVEALQEFGPIS. . . . . . . . YVVVM. . . . . PKKRQALVEFEDV
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   101........110.........120......... 130.... .....140.......
 
   193......200.. .......210........
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Query Sequence  ESVELALKLL. . DEDEIRGYKLHVEVAK
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Template Sequence  LGACNAVNYAADNQIYIAGHPAFVNYST
Template Known Secondary structure  S
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   148.150.........160.........170.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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