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Job DescriptionQ8BGC0
Confidence99.82%DateTue Jul 30 13:06:17 BST 2013
Rank16Aligned Residues160
% Identity26%Templatec1fnxH_
PDB info PDB header:immune system/rnaChain: H: PDB Molecule:hu antigen c; PDBTitle: solution structure of the huc rbd1-rbd2 complexed with the2 au-rich element
ResolutionUNK
Model Dimensions (Å)X:60.323 Y:48.152 Z:37.566

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170...... ...180.........
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Query Sequence  DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLCCY
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Template Sequence  DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIES. . . . . . . . CKLVRDKITGQSLGYGFVNY
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   36...40.........50.........60....... ..70.........80.......
 
   190.........200.........210.........220.........230.........240.........
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Query Sequence  LKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLD
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Template Sequence  SDPNDADKAINTLNGLKLQTKTIKVSYAR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   88.90.........100.........110......
 
   250.........260.........270.........280.........290.........300........
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Query Sequence  WRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF.
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Template Sequence  . . . . . . . PSSASIRDANLYVSGL. . . . . . . . . . . PKTMSQKEMEQLFSQYGRIITSRILL
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   117..120.........130.. .......140.........150........
 
   309310.........320.........330.........340 .......
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Query Sequence  . . . DRHPDGVASVSFREPEEADHCIQTLDGRWFGG. . RQITAQA
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Template Sequence  DQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF
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   159160.........170.........180.........190.........200..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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