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Job DescriptionQ8BGC0
Confidence99.49%DateTue Jul 30 13:06:17 BST 2013
Rank180Aligned Residues82
% Identity18%Templatec2dnpA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:rna-binding protein 14; PDBTitle: solution structure of rna binding domain 2 in rna-binding2 protein 14
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190..
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Query Sequence  NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKK
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Template Sequence  TWKIFVGNVSAACTSQELRSLFERRGRVI. . . . . . . . ECDVV. . . . . . . KDYAFVHMEKE
Template Known Secondary structure  S

S

TT

S
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S
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   78.80.........90.........100...... ...110. ........120..
 
   193......200.........210.........220.........
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Query Sequence  ESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASK
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Template Sequence  ADAKAAIAQLNGKEVKGKRINVELSTKGQKKSGPSSG
Template Known Secondary structure  TT
TT
S






S



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   123......130.........140.........150.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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