Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.48%DateTue Jul 30 13:06:17 BST 2013
Rank183Aligned Residues92
% Identity15%Templatec2e5iA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170....
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Query Sequence  KGEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLY
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Template Sequence  GKRITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQ. . . . . . . . RIVIF
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   199200.........210.........220.........230.........240..... ....250
 
   175....180.........190.........200....... ..210........
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Query Sequence  KDDQGNLKGDGLCCYLKKESVELALKLLDEDEI. . RGYKLHVEVAK
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Template Sequence  KRN. . . . GIQAMVEFESVLCAQKAKAALNGADIYAGCCTLKIEYAR
Template Known Secondary structure  SS....SSSTT


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   251.. ......260.........270.........280.........290..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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