Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.56%DateTue Jul 30 13:06:17 BST 2013
Rank133Aligned Residues86
% Identity27%Templatec3begB_
PDB info PDB header:transferase/splicingChain: B: PDB Molecule:splicing factor, arginine/serine-rich 1; PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190...
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  TNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKKE
Query Conservation 
 


  

 
 
  
    
   
 
           
   
  
  

   
 
   
Alig confidence 




























........





......










Template Conservation 




 


   
  

   
   
 
  ........      ......
 


 
   
Template Sequence  NRVVVSGLPPSGSWQDLKDHMREAGDVCY. . . . . . . . ADVYRD. . . . . . GTGVVEFVRKE
Template Known Secondary structure 



SS

TTGGGS
........
TT......SSS
Template Predicted Secondary structure 













........





......


Template SS confidence 



























































   121........130.........140......... 150..... ....160......
 
   194.....200.........210.........220.........230...
Predicted Secondary structure 





















Query SS confidence 







































Query Sequence  SVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKK
Query Conservation 
   

  
         
 
  
 
              
Alig confidence 







































Template Conservation   
  

  
 
    
  
 
                


Template Sequence  DMTYAVRKLDNTKFRSHEGETAYIRVKVDGSYGRSRSRSR
Template Known Secondary structure  TT
B


TTS


B






S

S

Template Predicted Secondary structure 


















Template SS confidence 







































   167..170.........180.........190.........200......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D