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Job DescriptionQ8BGC0
Confidence99.59%DateTue Jul 30 13:06:17 BST 2013
Rank104Aligned Residues89
% Identity19%Templatec3ex7B_
PDB info PDB header:hydrolase/rna binding protein/rnaChain: B: PDB Molecule:rna-binding protein 8a; PDBTitle: the crystal structure of ejc in its transition state
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170...... ...180......
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Query Sequence  VEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGL
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Template Sequence  QRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKN. . . . . . . . IHLNLDRRTGYLKGYTL
Template Known Secondary structure 


SSSS

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B
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   67..70.........80.........90.........100. ........110........
 
   187..190.........200.........210.........220....
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Query Sequence  CCYLKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGE
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Template Sequence  VEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPK
Template Known Secondary structure  SSTT
BSSSSB
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BSSS

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   119120.........130.........140.........150......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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