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Job DescriptionQ8BGC0
Confidence99.85%DateTue Jul 30 13:06:17 BST 2013
Rank12Aligned Residues159
% Identity26%Templatec1b7fA_
PDB info PDB header:rna-binding protein/rnaChain: A: PDB Molecule:protein (sxl-lethal protein); PDBTitle: sxl-lethal protein/rna complex
Resolution2.60 Å
Model Dimensions (Å)X:64.294 Y:43.210 Z:40.291

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170...... ...180.........190
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Query Sequence  RNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLCCYL
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Template Sequence  SNTNLIVNYLPQDMTDRELYALFRAIGPIN. . . . . . . . TCRIMRDYKTGYSYGYAFVDFT
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   123......130.........140.........150.. .......160.........170....
 
   191........200.........210.........220.........230.........240.........250
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Query Sequence  KKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDW
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Template Sequence  SEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STT
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   175....180.........190.........200.........210..
 
   251........260.........270.........280.........290.........300........
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Query Sequence  RPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF. .
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Template Sequence  . . . . . . . . . . . . . . . . LYVTNL. . . . . . . . . . . PRTITDDQLDTIFGKYGSIVQKNILRD
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   213..... .220.........230.........240.....
 
   309310.........320.........330.........340 .......
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Query Sequence  . . DRHPDGVASVSFREPEEADHCIQTLDGRWFGG. . RQITAQA
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Template Sequence  KLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL
Template Known Secondary structure  TTT

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   246...250.........260.........270.........280........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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