Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.61%DateTue Jul 30 13:06:17 BST 2013
Rank74Aligned Residues84
% Identity27%Templated2cq0a1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170...... ...180.....
Predicted Secondary structure 

























.





Query SS confidence 

















































.








Query Sequence  HVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDG
Query Conservation         
 


  

 
 
  
    
   
 
           
   
.  
  

  
Alig confidence 



































........





.








Template Conservation           
 
 


   
   
   
   
 
  ........               
Template Sequence  NRRADDNATIRVTNLSEDTRETDLQELFRPFGSISR. . . . . . . . IYLAKDKTTGQSKGFA
Template Known Secondary structure 



SSSS

TT

TTSTTT

........
SSS
S
Template Predicted Secondary structure 




















........














Template SS confidence 



























































   232.......240.........250.........260....... ..270.........280...
 
   186...190.........200.........210........
Predicted Secondary structure 








Query SS confidence 
































Query Sequence  LCCYLKKESVELALKLLDEDEIRGYKLHVEVAK
Query Conservation   
 
   

   

  
         
 
  
 
Alig confidence 
































Template Conservation   
 
     
  

  


    
  
 
  

Template Sequence  FISFHRREDAARAIAGVSGFGYDHLILNVEWAK
Template Known Secondary structure  SSTTT
TT
SS
Template Predicted Secondary structure 










Template SS confidence 
































   284.....290.........300.........310......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D