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Job Description | Q8BGC0 | Confidence | 99.60% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 90 | Aligned Residues | 76 |
% Identity | 22% | Template | d1cvja1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
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Resolution | 2.60 |
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135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | . |
D | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | K | E |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | L | Y | V | G | D | L | H | P | D | V | T | E | A | M | L | Y | E | K | F | S | P | A | G | P | I | L | S | . |
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I | R | V | C | R | D | M | I | T | R | R | S | L | G | Y | A | Y | V | N | F | Q | Q | P | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
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40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
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194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | A | E | R | A | L | D | T | M | N | F | D | V | I | K | G | K | P | V | R | I | M | W | S | Q |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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