Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.72%DateTue Jul 30 13:06:17 BST 2013
Rank30Aligned Residues98
% Identity19%Templated1hl6a_
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.
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Query Sequence  SKRKGEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKV
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Template Sequence  KEKAKHRKGRGFGPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKN. . . . . . . . I
Template Known Secondary structure  T




SGGG


B

BTTBS

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TTS
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   27..30.........40.........50.........60.........70....... .
 
   172.... ...180.........190.........200.........210.......
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Query Sequence  KLYKD. DQGNLKGDGLCCYLKKESVELALKLLDEDEIRGYKLHVEVA
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Template Sequence  HLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC
Template Known Secondary structure 

B
TTT
SB
S
SSTT
TT
S
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   103......110.........120.........130.........140.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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