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Job DescriptionQ8BGC0
Confidence99.50%DateTue Jul 30 13:06:17 BST 2013
Rank176Aligned Residues74
% Identity20%Templatec2dgxA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:kiaa0430 protein; PDBTitle: solution structure of the rna recognition motif in kiaa04302 protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.. .......160.........170.........180.........190
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Query Sequence  NVYVSGLPPDITVDEFIQ. . . . LMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYL
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Template Sequence  DVQVSNIDYRLSRKELQQLLQEAFARHGKVKS. . . . . . . . VELSPHTDY. . QLKAVVQME
Template Known Secondary structure  S

TTS
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   556...560.........570.........580....... ..590...... ...600.....
 
   191........200.........210........
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Query Sequence  KKESVELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  NLQDAIGAVNSLHRYKIGSKKILVSLAT
Template Known Secondary structure  STTTT

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   606...610.........620.........630...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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