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Job Description | Q8BGC0 | Confidence | 99.57% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 129 | Aligned Residues | 86 |
% Identity | 20% | Template | c2lxiA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:rna-binding protein 10; |
PDBTitle: nmr structure of the n-terminal rna binding domain 1 (rrm1) of the2 protein rbm10 from homo sapiens
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Resolution | UNK |
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133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | . |
I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | . |
D | Q | G | N | L | K | G | D | G | L | C | C | Y | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | N | I | V | M | L | R | M | L | P | Q | A | A | T | E | D | D | I | R | G | Q | L | Q | S | H | G | V | Q | A | R | E | . |
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V | R | L | M | R | N | K | S | S | G | Q | S | R | G | F | A | F | V | E | F | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
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191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | E | S | V | E | L | A | L | K | L | L | D | E | . |
D | E | I | R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K | G | E | Y | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | L | Q | D | A | T | R | W | M | E | A | N | Q | H | S | L | N | I | L | G | Q | K | V | S | M | H | Y | S | D | P | K | P | K | I | N | E | D |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  | T | T |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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