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Job DescriptionQ8BGC0
Confidence99.42%DateTue Jul 30 13:06:17 BST 2013
Rank202Aligned Residues78
% Identity19%Templatec3ns5B_
PDB info PDB header:translationChain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b; PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.. .......150.........160.........170...... ...180.....
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Query Sequence  NTNVYVSGLP. . . . . . PDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDG
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Template Sequence  DQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVN. . . . . . . . MEFPIDEATGKTKGFL
Template Known Secondary structure  S
S



BGGGTTTS
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   76...80.........90.........100.........110. ........120.......
 
   186...190.........200.........210 ........
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Query Sequence  LCCYLKKESVELALKLLDEDEIRGY. KLHVEVAK
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Template Sequence  FVECGSMNDAKKIIKSFHGKRLDLKHRLFLYTMK
Template Known Secondary structure  SSTT
BSSSS
B


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   128.130.........140.........150.........160.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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