Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.60%DateTue Jul 30 13:06:17 BST 2013
Rank91Aligned Residues77
% Identity16%Templatec3nnhA_
PDB info PDB header:rna binding protein/rnaChain: A: PDB Molecule:cugbp elav-like family member 1; PDBTitle: crystal structure of the cugbp1 rrm1 with guuguuuuguuu rna
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170......... 180.........
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Query Sequence  NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQG. . . NLKGDGLCCY
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Template Sequence  AIKMFVGQVPRTWSEKDLRELFEQYGAVYE. . . . . . . . INVLRDRSQNPPQSKGCCFVTF
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   15....20.........30.........40.... .....50.........60......
 
   190.........200....... ..210.......
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Query Sequence  LKKESVELALKLLDEDEI. . . RGYKLHVEVA
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Template Sequence  YTRKAALEAQNALHNMKVLPGMHHPIQMKPA
Template Known Secondary structure  S
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   67..70.........80.........90.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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