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Job DescriptionQ8BGC0
Confidence99.56%DateTue Jul 30 13:06:17 BST 2013
Rank136Aligned Residues87
% Identity17%Templatec2dh9A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........
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Query Sequence  EDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCY
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Template Sequence  SSGSSGIFVRNLPFDFTWKMLKDKFNECGHVLY. . . . . . . . ADIKME. NGKSKGCGVVKF
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   534.....540.........550.........560...... ...570.. .......580....
 
   190.........200.........210.........220.....
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Query Sequence  LKKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEY
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Template Sequence  ESPEVAERACRMMNGMKLSGREIDVRIDRNASGPSS
Template Known Secondary structure  SSTTT

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   585....590.........600.........610.........620
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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