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Job DescriptionQ8BGC0
Confidence99.53%DateTue Jul 30 13:06:17 BST 2013
Rank150Aligned Residues81
% Identity21%Templatec3pgwP_
PDB info PDB header:splicing/dna/rnaChain: P: PDB Molecule:u1-a; PDBTitle: crystal structure of human u1 snrnp
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150. ........160.........170.........180...
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Query Sequence  VEEDRNTNVYVSGLPPDITVDEFI. . . . QLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKG
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Template Sequence  PETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQI. . . . . . . . . . LDILVSRSLKMRG
Template Known Secondary structure  STTS

S
S

TTS
TTTS
B..........S

B


STTTSS
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   4.....10.........20.........30.........40 .........50...
 
   184.....190.........200.........210........
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Query Sequence  DGLCCYLKKESVELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  QAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAK
Template Known Secondary structure 
BSSTTTT
TT



S
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   54.....60.........70.........80........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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