Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.64%DateTue Jul 30 13:06:17 BST 2013
Rank54Aligned Residues76
% Identity28%Templatec3bs9A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:nucleolysin tia-1 isoform p40; PDBTitle: x-ray structure of human tia-1 rrm2
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170...... ...180.........190...
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Query Sequence  NVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLCCYLKKE
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Template Sequence  HVFVGDLSPEITTAAIAAAFAPFGRISD. . . . . . . . ARVVKDMATGKSKGYGFVSFFNKW
Template Known Secondary structure  S

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   96...100.........110.........120... ......130.........140.......
 
   194.....200.........210........
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Query Sequence  SVELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  DAENAIQQMGGQWLGGRQIRTNWAT
Template Known Secondary structure  TT
TT

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   148.150.........160.........170..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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