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Job Description | Q8BGC0 | Confidence | 99.48% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 188 | Aligned Residues | 100 |
% Identity | 18% | Template | c2fc9A_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:ncl protein; |
PDBTitle: solution structure of the rrm_1 domain of ncl protein
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Resolution | UNK |
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120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | A | E | S | G | W | F | H | V | E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | S | G | S | S | G | N | S | T | W | S | G | E | S | K | T | L | V | L | S | N | L | S | Y | S | A | T | E | E | T | L | Q | E | V | F | E | K | A | T | . |
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F | I | K | V | P | Q | N | Q | N | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
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. | . | . | . | . | . | . | . | . | 50 |
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180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | L | K | G | D | G | L | C | C | Y | L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K | G | E | Y | D | A | S | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | S | K | G | Y | A | F | I | E | F | A | S | F | E | D | A | K | E | A | L | N | S | C | N | K | R | E | I | E | G | R | A | I | R | L | E | L | Q | G | P | R | G | S | P | N | S | G | P | S | S | G |
Template Known Secondary structure |   |
| B |
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| S | S |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  | T | T |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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