Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.62%DateTue Jul 30 13:06:17 BST 2013
Rank69Aligned Residues75
% Identity24%Templatec4f26A_
PDB info PDB header:translationChain: A: PDB Molecule:polyadenylate-binding protein 1; PDBTitle: crystal structure of the second rrm domain of human pabpc1 a ph 9.0
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190....
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Query Sequence  NVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKKES
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Template Sequence  NIFIKNLDKSIDNKALYDTFSAFGNILS. . . . . . . . CKVVCDE. NGSKGYGFVHFETQEA
Template Known Secondary structure  S

TT

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   100.........110.........120....... ..130.... .....140.........150
 
   195....200.........210........
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Query Sequence  VELALKLLDEDEIRGYKLHVEVAK
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Template Sequence  AERAIEKMNGMLLNDRKVFVGRFK
Template Known Secondary structure  TT
TT


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   151........160.........170....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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