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Job DescriptionQ8BGC0
Confidence99.94%DateTue Jul 30 13:06:17 BST 2013
Rank4Aligned Residues193
% Identity18%Templatec3h2uD_
PDB info PDB header:cell adhesionChain: D: PDB Molecule:raver-1; PDBTitle: human raver1 rrm1, rrm2, and rrm3 domains in complex with2 human vinculin tail domain vt
Resolution2.75 Å
Model Dimensions (Å)X:79.164 Y:35.592 Z:41.828

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.........180.........190
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Query Sequence  DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYL
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Template Sequence  RNRRKILIRGLPGDVTNQEVHDLLSDYELKY. . . . . . . . . CFV. . . . . DKYKGTAFVTLL
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TT

TTTS

S..............TTTT
S
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   56...60.........70.........80...... ... 90.........100.
 
   191........200.........210.........220.........230.........240.........250
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Query Sequence  KKESVELALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSLQQKQLDW
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Template Sequence  NGEQAEAAINAFHQSRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERC
Template Known Secondary structure  STT
TT




SS

TT

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   102.......110.........120.........130.........140.........150.........160.
 
   251........260... ..
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Query Sequence  RPERRAGPNRLRH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ER
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Template Sequence  FLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSR
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TTT

SSTT
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S

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   162.......170.........180.........190.........200.........210.........220.
 
   266...270.........280.........290.........300........ .310.........320..
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Query Sequence  VVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF. . . DRHPDGVASVSFRE
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Template Sequence  CLCVDRLPPGFNDV. . . . . . . . . . DALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYET
Template Known Secondary structure  S

TT


S..........TTSSS

S

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   222.......230..... ....240.........250.........260.........270.
 
   323......330.........340.......
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Query Sequence  PEEADHCIQTLDGRWFGGRQITAQA
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Template Sequence  AEMAEEAQQQADGLSLGGSHLRVSF
Template Known Secondary structure  TT
TT
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   272.......280.........290......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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