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Job Description | Q8BGC0 | Confidence | 99.65% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 48 | Aligned Residues | 92 |
% Identity | 16% | Template | c2dnoA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant; |
PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant
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Resolution | UNK |
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129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | R | G | E | D | R | K | L | F | V | G | M | L | G | K | Q | Q | T | D | E | D | V | R | K | M | F | E | P | F | G | T | I | D | . |
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E | C | T | V | L | R | G | P | D | G | T | S | K | G | C | A | F | V | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
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. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
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. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | L | K | K | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | . |
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R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K | G | E | Y | D | A | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | Q | T | H | A | E | A | Q | A | A | I | N | T | L | H | S | S | R | T | L | P | G | A | S | S | S | L | V | V | K | F | A | D | T | E | K | E | S | G | P | S | S | G |
Template Known Secondary structure |   |
 | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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