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Job DescriptionQ8BGC0
Confidence99.63%DateTue Jul 30 13:06:17 BST 2013
Rank58Aligned Residues91
% Identity16%Templatec2dhgA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:trna selenocysteine associated protein (secp43); PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150...... ...160.........170.........180.........190.
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Query Sequence  NTNVYVSGLPPDITVDEFIQLMSK. FGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLK
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Template Sequence  EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRG. . . . . . . . GKVVLDQTGVSKGYGFVKFTD
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   95....100.........110.........120..... ....130.........140......
 
   192.......200.... .....210.........220.........230.
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Query Sequence  KESVELALKLLDE. DEIRGYKLHVEVAKFQLKGEYDASKKK
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Template Sequence  ELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVESGP
Template Known Secondary structure  TTT

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   147..150.........160.........170.........180.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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