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Job Description | Q8BGC0 | Confidence | 99.67% | Date | Tue Jul 30 13:06:17 BST 2013 |
Rank | 43 | Aligned Residues | 88 |
% Identity | 16% | Template | c3egnA_ |
PDB info |
PDB header:splicing | Chain: A: PDB Molecule:rna-binding protein 40; |
PDBTitle: c-terminal rna recognition motif of the u11/u12 65k protein
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Resolution | 2.50 Å |
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133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K | V | K | L | Y | K | D | D | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | C | R | I | Y | V | K | N | L | A | K | H | V | Q | E | K | D | L | K | Y | I | F | G | R | Y | V | D | F | S | S | . |
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E | T | Q | R | I | M | F | D | I | R | L | M | K | E | G | R | M | K | G | Q | A | F | I | G | L | P | N | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | |
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. | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
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193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A | K | F | Q | L | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | A | A | A | K | A | L | K | E | A | N | G | Y | V | L | F | G | K | P | M | V | V | Q | F | A | R | S | A | R | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | B |  |  | T | T |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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