Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.74%DateTue Jul 30 13:06:17 BST 2013
Rank27Aligned Residues90
% Identity27%Templated2cpea1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170...... ...180.......
Predicted Secondary structure 























.





Query SS confidence 















































.










Query Sequence  EEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD. DQGNLKGDGLC
Query Conservation       
 


  

 
 
  
    
   
 
           
   
.  
  

   
Alig confidence 















































.










Template Conservation         
 
 


   
   
   
   
                        

 


Template Sequence  EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATV
Template Known Secondary structure 








TT

TTTS
B
B
SSS

BS

B
TTT
SB
S
Template Predicted Secondary structure 






























Template SS confidence 



























































   356...360.........370.........380.........390.........400.........410.....
 
   188.190.........200.........210........
Predicted Secondary structure 








Query SS confidence 






























Query Sequence  CYLKKESVELALKLLDEDEIRGYKLHVEVAK
Query Conservation   
   

   

  
         
 
  
 
Alig confidence 






























Template Conservation   
   
 
  

  


    
  
 
  
 
Template Sequence  SYEDPPTAKAAVEWFDGKDFQGSKLKVSLAR
Template Known Secondary structure  BSSTT
TT

SS
Template Predicted Secondary structure 








Template SS confidence 






























   416...420.........430.........440......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D