Return to main results Retrieve Phyre Job Id

Job DescriptionQ8BGC0
Confidence99.59%DateTue Jul 30 13:06:17 BST 2013
Rank100Aligned Residues85
% Identity19%Templatec2x1aA_
PDB info PDB header:transcription/rnaChain: A: PDB Molecule:mrna 3'-end-processing protein rna15; PDBTitle: structure of rna15 rrm with rna bound (g)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190..
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNLKGDGLCCYLKK
Query Conservation   
 


  

 
 
  
    
   
 
           
   
  
  

   
 
   
Alig confidence 





























.......






















Template Conservation     
 
 


       
   
   
 
  .......               


 
   
Template Sequence  SRVVYLGSIPYDQTEEQILDLCSNVGPVIN. . . . . . . LKMMFDPQTGRSKGYAFIEFRDL
Template Known Secondary structure 
SS

TT

S
.......TTTTSS
Template Predicted Secondary structure 















.......












Template SS confidence 



























































   17..20.........30.........40...... ...50.........60.........
 
   193......200.........210.........220....
Predicted Secondary structure 












Query SS confidence 































Query Sequence  ESVELALKLLDEDEIRGYKLHVEVAKFQLKGE
Query Conservation 

   

  
         
 
  
 
     
Alig confidence 































Template Conservation    
  

  
      
  
 
  
      
Template Sequence  ESSASAVRNLNGYQLGSRFLKCGYSSNSDISG
Template Known Secondary structure  TT
TT








Template Predicted Secondary structure 












Template SS confidence 































   70.........80.........90.........100.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D