Job Description P16277 Confidence 100.00% Date Tue Jul 30 13:14:40 BST 2013 Rank 281 Aligned Residues 248 % Identity 21% Template c4fi1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:casein kinase ii subunit alpha; PDBTitle: crystal structure of scck2 alpha in complex with atp Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		E	W	E	I	P	R	Q	S	L	K	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	K	.	N	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	E	A	F	L	G	E	A	N	V	M	K	T	L
Query Conservation																															.
Alig confidence																															.												.	.
Template Conservation																																											.	.
Template Sequence		D	W	S	T	N	T	K	D	Y	E	I	E	N	K	V	G	R	G	K	Y	S	E	V	F	Q	G	V	K	L	D	S	K	V	K	I	V	I	K	M	L	K	.	.	P	V	K	K	K	K	I	K	R	E	I	K	I	L	T	D	L
Template Known Secondary structure				B	S		S	T	T											T	T									T	T	T	T										.	.	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																																									286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	E	R	L	V	R	L	Y	A	V	V	T	R	E	P	.	.	.	I	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		S	N	E	K	V	P	P	T	T	L	P	F	Q	K	D	Q	Y	Y	T	N	Q	K	E	D	V	L	K	F	I	R	P	Y	I	F	D	Q	P	H	N	G	H	A	N	I	I	H	L	F	D	I	I	K	D	P	I	S	K	T	P	A
Template Known Secondary structure					S	S		G	G	G	S																	T	T			S					S				G	G	G	G	B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	T	D	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	V	A	E	G	M	A	Y	I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		L	V	F	E	Y	V	D	N	V	D	F	R	I	L	Y	P	.	.	.	.	.	K	L	T	D	L	E	I	R	F	Y	M	F	E	L	L	K	A	L	D	Y	C	H	S	M	G	I	M	H	R	D	V	K	P	H	N	V	M	I	D
Template Known Secondary structure																G	G	.	.	.	.	.	G																							T	T							S	G	G	G
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		364		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		E	.	T	L	C	C	K	I	A	D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	I
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		H	K	N	K	K	L	R	L	I	D	W	G	L	A	E	F	Y	H	V	N	M	E	Y	N	V	R	V	A	S	R	F	F	K	G	P	E	L	L	V	D	Y	R	M	Y	D	Y	S	L	D	L	W	S	F	G	T	M	L	A	S	M
Template Known Secondary structure		G	G	G	T								T	T						T	T					S			S		G	G	G							T	T						T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.																																					.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	G	Y
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	K	R	E	P	F	F	H	G	T	S	N	T	D	Q	L	V	K	I	V	K	V	L	G	T	S	D	F	E	K	Y	L	L	K	Y	E	I	T	L	P	R	E	F	Y	D	M	D	Q	Y	I	R	K	P	W	H	R	F	I	N
Template Known Secondary structure				T		S	S	S	S			S	S																								T	T					G	G	G	G	G									G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	P	C	P	E	T	C	P	P	E	L	Y	N	D	I	I	T	E	C	W	R	G	R	P	E	E	R	P	T	F	E	F	L	Q	S
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		D	G	N	K	H	L	S	G	N	D	E	I	.	I	D	L	I	D	N	L	L	R	Y	D	H	Q	E	R	L	T	A	K	E	A	M	G
Template Known Secondary structure		T	T	T						S				.								S		S	S	G	G	G	S								T
Template Predicted Secondary structure														.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D