Job Description P16277 Confidence 100.00% Date Tue Jul 30 13:14:40 BST 2013 Rank 40 Aligned Residues 248 % Identity 40% Template c4aojA_ PDB info PDB header:transferase Chain: A: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: human trka in complex with the inhibitor az-23 Resolution 2.75 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																															.	.	.																.
Query SS confidence																															.	.	.																.
Query Sequence		W	E	I	P	R	Q	S	L	K	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	K	N	.	.	.	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	.	P	E	A	F	L	G	E	A	N	V	M	K
Query Conservation																															.	.	.																.
Alig confidence																															.	.	.																.
Template Conservation
Template Sequence		H	H	I	K	R	R	D	I	V	L	K	W	E	L	G	E	G	A	F	G	K	V	F	L	A	E	C	H	N	L	L	P	K	M	L	V	A	V	K	A	L	K	E	A	S	E	S	A	R	Q	D	F	Q	R	E	A	E	L	L	T
Template Known Secondary structure			B			G	G	G											S	S									S	S	S												S			S															T
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																				.																					.	.
Query SS confidence																				.																					.	.
Query Sequence		T	L	Q	H	E	R	L	V	R	L	Y	A	V	V	T	R	E	P	.	I	Y	I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	T	D	.	.	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	V	A	E
Query Conservation																				.																					.	.
Alig confidence																				.																					.	.
Template Conservation
Template Sequence		M	L	Q	H	Q	H	I	V	R	F	F	G	V	C	T	E	G	R	P	L	L	M	V	F	E	Y	M	R	H	G	D	L	N	R	F	L	R	S	H	G	P	D	P	G	P	L	G	L	G	Q	L	L	A	V	A	S	Q	V	A	A
Template Known Secondary structure		T				T	T	B									S	S	S	S									T	T		B							T	S	S					S
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	A	Y	I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S	E	T	L	C	C	K	I	A	D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	M	V	Y	L	A	G	L	H	F	V	H	R	D	L	A	T	R	N	C	L	V	G	Q	G	L	V	V	K	I	G	D	F	G	T	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	R	W	M	P	P	E	S
Template Known Secondary structure									T	T				S				G	G	G					T	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.															.	.	.	.	.	.	680	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	I	V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	S	L	E	H	G	Y	R	M	P	C	P	E	T	C	P	P	E	L	Y	N
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		I	L	Y	R	K	F	T	T	E	S	D	V	W	S	F	G	V	V	L	W	E	I	F	T	Y	G	K	Q	P	W	Y	Q	L	S	N	T	E	A	I	D	C	I	T	Q	G	R	E	L	E	R	P	R	A	C	P	P	E	V	.	Y
Template Known Secondary structure			T	T																					T	T	S			T	T		S	S												T							T	T						.
Template Predicted Secondary structure																																																												.
Template SS confidence
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.		.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	T	E	C	W	R	G	R	P	E	E	R	P	T	F	E	F	L	Q	S	V	L	E	D	F	Y	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	M	R	G	C	W	Q	R	E	P	Q	Q	R	H	S	I	K	D	V	H	A	R	L	Q	A	L	A	Q	A
Template Known Secondary structure										S	S	T	T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D