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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank126Aligned Residues253
% Identity39%Templatec3zbfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase ros; PDBTitle: structure of human ros1 kinase domain in complex with crizotinib
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250...... ...260.........270.... .....280..
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Query Sequence  EIPRQSLKLVRKLGSGQFGEVWMGYYKN. . . . NMKVAIKTLKEGTMSPEA. . FLGEANVM
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Template Sequence  AFPREKLTLRLLLGSGEVYEGTAVDILGVGSGEIKVAVKTLKKGSTDQEKIEFLKEAHLM
Template Known Secondary structure  B

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   19391940.........1950.........1960.........1970.........1980.........1990........
 
   283......290.........300. ........310......... 320.........330......
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Query Sequence  KTLQHERLVRLYAVVTREP. IYIVTEYMARGCLLDFLK. . . . . TDEGSRLSLPRLIDMSA
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Template Sequence  SKFNHPNILKQLGVCLLNEPQYIILELMEGGDLLTYLRKARMATFYGPLLTLVDLVDLCV
Template Known Secondary structure  T


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   2002.......2010.........2020.........2030.........2040.........2050.........2060.
 
   337..340.........350.........360.........370.........380.........390......
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Query Sequence  QVAEGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWT
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Template Sequence  DISKGCVYLERMHFIHRDLAARNCLVSVKDYTSPRIVKIG. . . . . DFGLARDIYLPVRWM
Template Known Secondary structure  TT
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   2062.......2070.........2080.........2090.........2100. ........2110......
 
   397..400.........410.........420.........430.........440.........450......
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Query Sequence  APEAIHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPP
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Template Sequence  APESLMDGIFTTQSDVWSFGILIWEILTLGHQPYPAHSNLDVLNYVQTGGRLEPPRNCPD
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   21292130.........2140.........2150.........2160.........2170.........2180........
 
   457..460.........470.........480.......
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Query Sequence  ELYNDIITECWRGRPEERPTFEFLQSVLEDF
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Template Sequence  DL. WNLMTQCWAQEPDQRPTFHRIQDQLQLF
Template Known Secondary structure  .T
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   21892190 .........2200.........2210........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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