Job Description P16277 Confidence 100.00% Date Tue Jul 30 13:14:40 BST 2013 Rank 193 Aligned Residues 242 % Identity 10% Template c3vwaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		235	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure								.																.
Query SS confidence								.																.
Query Sequence		L	K	L	V	R	K	.	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	K	.	N	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	E	A	F	L	G	E	A	N	V	M	K	T	L	Q	H	E	R	L	V	R
Query Conservation								.																.
Alig confidence								.																.
Template Conservation
Template Sequence		Y	T	I	E	E	T	A	I	T	E	T	A	L	W	Q	C	F	D	G	T	R	K	A	D	S	L	P	V	T	V	F	K	A	K	R	S	P	E	N	E	S	L	I	L	N	A	V	H	K	S	K	I	L	K	I	P	G	L	C	T
Template Known Secondary structure						S	S		S				S	S									T	T	T													T	T	T																	T	T	B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	Y	A	V	V	T	R	E	P	.	.	I	Y	I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	T	D	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	V	A	E	G	M	A	Y	I	E	R	M	N	S
Query Conservation											.	.
Alig confidence											.	.																				.	.	.	.																							.	.
Template Conservation																																.	.	.	.																							.	.
Template Sequence		V	L	E	T	F	D	S	D	P	Q	S	T	F	I	V	T	E	R	V	V	P	F	P	W	D	N	L	G	S	L	.	.	.	.	S	Q	N	K	F	G	V	E	L	G	I	S	Q	L	L	A	T	L	G	F	L	K	.	.	N	F
Template Known Secondary structure								S	S	T	T	S													G	G	G					.	.	.	.	T	T																			T	T	.	.	T
Template Predicted Secondary structure																																.	.	.	.																							.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	R	D	L	R	A	A	N	I	L	V	S	E	T	L	C	C	K	I	A	D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	H	F	G	V	F	T	I	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	G	T	L	S	K	D	S	V	F	I	N	I	K	G	E	W	V	L	F	G	L	E	L	C	S	S	K	E	G	L	S	A	F	E	F	A	S	R	A	R	S	Y	Y	N	I	I	G	S	Q	L	P	C	E	D	P	N	T	I
Template Known Secondary structure							S	G	G	G					T	T	S								T	T				S	T	T																		T						S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.											.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	W	S	F	G	V	L	L	M	E	I	V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	S	L	E	H	G	Y	R	M	.	.	.	.	.	.	.	.	.	.	P	C	P	E	T	C	P	P	E	L	Y	N
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		D	S	X	G	L	G	L	L	I	K	S	L	X	A	.	P	S	C	L	P	K	D	W	I	V	N	V	N	X	I	S	D	G	K	I	T	I	E	N	F	R	K	R	L	E	N	T	E	T	W	R	S	N	P	L	I	N	F	Y	Q
Template Known Secondary structure														S		.	T	T	T	S		G	G	G									T	T		S												S
Template Predicted Secondary structure																.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	T	E	C	W	R	G	R	P	E	E	R	P	T	F	E	F	L	Q	S	V	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	L	R	E	L	H	I	K	D	P	Q	G	K	L	V	V	X	S	N	L	E	N	L
Template Known Secondary structure		.				T	G	G	G	S
Template Predicted Secondary structure		.
Template SS confidence
			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D