Job Description P16277 Confidence 100.00% Date Tue Jul 30 13:14:40 BST 2013 Rank 311 Aligned Residues 224 % Identity 20% Template c3rnyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of human rsk1 c-terminal kinase domain Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		K	N	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	E	A	F	L	G	E	A	N	V	M	K	T	L	.	Q	H	E	R	L	V	R	L	Y	A	V	V	T	R	E	P	I	Y	I	V	T	E	Y	M	A	R	G	C
Query Conservation																																	.
Alig confidence														.	.	.	.	.	.	.													.													.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																										.	.	.	.	.
Template Sequence		V	H	N	M	E	Y	A	V	K	V	I	D	.	.	.	.	.	.	.	K	P	S	E	E	I	E	I	L	L	R	Y	G	Q	H	P	N	I	I	T	L	K	D	V	Y	.	.	.	.	.	D	L	V	T	E	L	M	R	G	G	E
Template Known Secondary structure														.	.	.	.	.	.	.													T	T	S	T	T	B								.	.	.	.	.									S		B
Template Predicted Secondary structure														.	.	.	.	.	.	.																										.	.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.								.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.						.	.	.	.	.	.	.	480	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	F	L	K	T	D	E	G	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	V	A	E	G	M	A	Y	I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S	E	T	L	C	C	K	I	A	D	F
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		L	L	D	K	I	.	.	L	R	Q	K	F	F	S	E	R	E	A	S	F	V	L	H	T	I	G	K	T	V	E	Y	L	H	S	Q	G	V	V	H	R	D	L	K	P	S	N	I	L	Y	V	D	E	S	G	N	P	E	C	L	R
Template Known Secondary structure							.	.	T	S	S	S																								T	T				S				G	G	G				S	S	T	T			G	G	G
Template Predicted Secondary structure							.	.
Template SS confidence
		497	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	I	V	T	Y	G	R	V	P	Y	.	.	.
Query Conservation																																																											.	.	.
Alig confidence				.	.																																																.						.	.	.
Template Conservation				.	.																																																.
Template Sequence		I	C	.	.	D	F	G	F	A	K	Q	L	R	A	E	N	G	L	L	M	T	P	C	Y	T	E	V	L	K	R	Q	G	Y	D	E	G	C	D	I	W	S	L	G	I	L	L	Y	T	M	L	A	.	G	Y	T	P	F	A	N	G
Template Known Secondary structure				.	.			T	T					B		S	S			B			G	G	G																												.	S	S		S	S		S	S
Template Predicted Secondary structure				.	.																																																.
Template SS confidence
		555	.			.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		P	G	M	S	N	P	E	V	I	R	S	L	E	H	G	Y	R	M	P	C	P	.	.	.	E	T	C	P	P	E	L	Y	N	D	I	I	T	E	C	W	R	G	R	P	E	E	R	P	T	F	E	F	L	Q	S	V	L	E	D	F
Query Conservation																							.	.	.
Alig confidence																							.	.	.								.																									.	.
Template Conservation																																	.																									.	.
Template Sequence		P	S	D	T	P	E	E	I	L	T	R	I	G	S	G	K	F	T	L	S	G	G	N	W	N	T	V	S	E	T	A	.	K	D	L	V	S	K	M	L	H	V	D	P	H	Q	R	L	T	A	K	Q	V	L	Q	H	.	.	P	W
Template Known Secondary structure		T	T													T						S	G	G	G	G	G	S					.								S		S	S	T	T	S	S							T	T	S	.	.
Template Predicted Secondary structure																																	.																									.	.
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.			.	.
		488	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	A	T	E	G	Q	Y	E	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	Q	K	D	K	L	P	Q	S	Q
Template Known Secondary structure					G	G	G	S			S
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D