Job Description P16277 Confidence 100.00% Date Tue Jul 30 13:14:40 BST 2013 Rank 160 Aligned Residues 241 % Identity 22% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.													.	.
Query SS confidence																								.													.	.
Query Sequence		Q	S	L	K	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	.	K	N	N	M	K	V	A	I	K	T	L	K	.	.	E	G	T	M	S	P	E	A	F	L	G	E	A	N	V	M	K	T	L	Q	H	E	R
Query Conservation																								.													.	.
Alig confidence														.										.													.	.
Template Conservation														.
Template Sequence		T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G
Template Known Secondary structure														.		S								T	T	T													S	T	T	T													T	S				T	T
Template Predicted Secondary structure														.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.															.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		L	V	R	L	Y	A	V	V	T	R	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	.	T	D	E	G	S	R	L	S	L	P	R	L	I	D	M
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K	W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I
Template Known Secondary structure		B												S																							S	S								T			S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	V	A	E	G	M	A	Y	I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S	E	T	L	C	C	K	I	A	D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K
Query Conservation
Alig confidence																																													.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K	V	G	D	F	G	L	V	T	.	.	.	.	A	M	D	Q	D	T	H	G	Q	V	T	K	L
Template Known Secondary structure															T	T								G	G	G					T	T									T	T			.	.	.	.			S									G	G
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		916	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.					.	960	.	.	.	.	.	.	.	.	.	970	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	A	P	E	A	I	H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	I	V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	S	L	E	H	G	Y	R	M	P	C	P	E	T	C
Query Conservation
Alig confidence																																.						.	.
Template Conservation																																.						.	.
Template Sequence		Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	.	S	F	S	T	Q	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L	F	T	Q	K
Template Known Secondary structure		G	S												T																S	.						.	.												T	T
Template Predicted Secondary structure																																.						.	.
Template SS confidence
		988	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.		.	.	1020	.	.			.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	E	L	Y	N	D	I	I	T	E	C	W	R	G	R	P	E	E	R	P	T	F	E	F	L	Q	S
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		Y	P	Q	E	.	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E
Template Known Secondary structure						.										S	S	G	G	G	S
Template Predicted Secondary structure						.
Template SS confidence
		1045	.	.	.		.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D