Job Description P16277 Confidence 100.00% Date Tue Jul 30 13:14:40 BST 2013 Rank 37 Aligned Residues 239 % Identity 24% Template c3qa8A_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																							.																	.	.
Query SS confidence																							.																	.	.
Query Sequence		K	L	V	R	K	L	G	S	G	Q	F	G	E	V	W	M	G	Y	Y	K	N	.	N	M	K	V	A	I	K	T	L	K	E	G	T	M	S	P	.	.	E	A	F	L	G	E	A	N	V	M	K	T	L	Q	H	E	R	L	V	R
Query Conservation																							.																	.	.
Alig confidence																							.																	.	.
Template Conservation
Template Sequence		E	M	K	E	R	L	G	T	G	G	F	G	Y	V	L	R	W	I	H	Q	D	T	G	E	Q	V	A	I	K	Q	C	R	Q	E	L	S	P	K	N	R	E	R	W	C	L	E	I	Q	I	M	K	K	L	N	H	P	N	V	V	S
Template Known Secondary structure									B		S	S	S	B							T	T	T	T										S																						B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																						.
Query SS confidence												.	.	.	.	.	.	.																						.
Query Sequence		L	Y	A	V	V	T	R	E	P	I	.	.	.	.	.	.	.	Y	I	V	T	E	Y	M	A	R	G	C	L	L	D	F	L	K	T	D	E	G	.	S	R	L	S	L	P	R	L	I	D	M	S	A	Q	V	A	E	G	M	A	Y
Query Conservation												.	.	.	.	.	.	.																						.
Alig confidence												.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		A	R	E	V	P	D	G	L	Q	K	L	A	P	N	D	L	P	L	L	A	M	E	Y	C	E	G	G	D	L	R	K	Y	L	N	Q	F	E	N	C	C	G	L	K	E	G	P	I	R	T	L	L	S	D	I	S	S	A	L	R	Y
Template Known Secondary structure							T	T	T					T	T	S	S									S	S		B							S	S	S		T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		I	E	R	M	N	S	I	H	R	D	L	R	A	A	N	I	L	V	S	E	T	L	C	.	.	.	C	K	I	A	D	F	G	L	A	R	I	I	D	S	E	Y	T	A	Q	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I
Query Conservation																									.	.	.
Alig confidence																									.	.	.																						.
Template Conservation																																																	.
Template Sequence		L	H	E	N	R	I	I	H	R	D	L	K	P	E	N	I	V	L	Q	P	G	P	Q	R	L	I	H	K	I	I	D	L	G	Y	A	K	E	L	D	Q	G	E	L	C	T	E	F	.	V	G	T	L	Q	Y	L	A	P	E	L	L
Template Known Secondary structure					T	T	B							S	T	T							S	S	S							S						B	T	T	S								.		S			T	T		S	S		S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.														.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	F	G	V	F	T	I	K	A	D	V	W	S	F	G	V	L	L	M	E	I	V	T	Y	G	R	V	P	Y	P	G	M	S	N	P	E	V	I	R	S	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	Y	R	M
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		E	Q	K	K	Y	T	V	T	V	D	Y	W	S	F	G	T	L	A	F	E	C	I	T	.	G	F	R	P	F	L	P	N	W	Q	P	V	Q	W	H	G	K	V	R	I	V	V	Y	D	D	L	T	G	A	V	K	F	S	S	V	L
Template Known Secondary structure				S			S	T	T															S	.	S		S	S			S	S						S	S	T	T					S					S	S	S					S	S	S
Template Predicted Secondary structure																									.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		449	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		P	C	P	E	T	C	P	.	.	.	P	E	L	Y	N	D	I	I	T	E	C	W	R	G	R	P	E	E	R	P	T
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		P	T	P	N	H	L	S	G	I	L	A	G	K	L	E	R	W	L	Q	C	M	L	M	W	H	Q	R	T	D	P	Q
Template Known Secondary structure				S					G	G	G												S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D