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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank55Aligned Residues250
% Identity24%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.... .....260.........270.........280.........290.......
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Query Sequence  RKLGSGQFGEVWMGYY. KNNMKVAIKTLKEGTMSPEAFLGEANVMKTLQHERLVRLYAVV
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Template Sequence  KVRKLGSYGEVLLCKEKNGHSEKAIKVIK. . KKFHEEIYNEISLLKSLDHPNIIKLFDVF
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   5960.........70.........80....... ..90.........100.........110......
 
   298.300. ........310.........320.........330.........340.........350......
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Query Sequence  TREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIERMNSIHRDLR
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Template Sequence  EDKKYFYLVTEFYEGGELFEQIINRH. . KFDECDAANIMKQILSGICYLHKHNIVHRDIK
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   135....140.........150.........160 .........170.........180.........190..
 
   357..360.. .......370.........380.........390.........400.........410...
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Query Sequence  AANILV. . . SETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGVFTIKADVW
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Template Sequence  PENILLENKNSLLNIKIVDFGLSSFFSKDYKL. RDRLGTAYYIAPEVLKK. KYNEKCDVW
Template Known Secondary structure  GGGSSTT

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   193......200.........210.........220.... .....230.........240. ........250
 
   414.....420.........430.........440.........450.. .......460.........470
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Query Sequence  SFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPE. . . TCPPELYNDIITECWRGR
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Template Sequence  SCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEA. KELIKLMLTYD
Template Known Secondary structure  .SS
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   251........260. ........270.........280.........290....... ..300........
 
   471........480.........490........
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Query Sequence  PEERPTFEFLQSVLEDFYTATEGQYELQ
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Template Sequence  YNKRCTAEEALNS. . RWIKKYANNINKS
Template Known Secondary structure  TTTS

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   309310.........320. ........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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