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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank26Aligned Residues261
% Identity24%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250..... ....260......... 270
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Query Sequence  NLAPKNLWAQDEWEIPRQSLKLVRKLGSGQFGEVWMGYYK. NNMKVAIKTLKEGT. . . . M
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Template Sequence  LLSQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD
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   277..280.........290.........300.........310.........320.........330......
 
   271........280..... ....290.........300. ........310.........320........
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Query Sequence  SPEAFLGEANVMKTL. QHERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSL
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Template Sequence  DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. . RFKE
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   383......390.........400.........410.........420.........430...... ...440
 
   329330.........340.........350.........360.........370.........380........
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Query Sequence  PRLIDMSAQVAEGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEG
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Template Sequence  PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT. K
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   441........450.........460.........470.........480.........490........ .
 
   389390.........400.........410.........420.........430.........440........
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Query Sequence  AKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRM
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Template Sequence  FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NV
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   501........510.........520.........530...... ...540.........550...... ..
 
   449450.........460.........470...... ...480..
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Query Sequence  PCPETCPPELYNDIITECWRGRPEERPT. . . . . FEFLQS
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Template Sequence  AYPKSMSKEA. VAICKGLMTKHPGKRLGCGPEGERDIKE
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   559560........ .570.........580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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