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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank78Aligned Residues255
% Identity26%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.... .....260.........270.........280.........290.
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYY. KNNMKVAIKTLKEGTMSPEAFLGEANVMKTLQHERLV
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIM
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   60.........70.. .......80.........90..... ....100.........110....
 
   292.......300. ........310.........320.........330.........340.........350
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Query Sequence  RLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIERMNS
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Template Sequence  KLYDFFEDKRNYYLVMECYKGGELFDEIIHRM. . KFNEVDAAVIIKQVLSGVTYLHKHNI
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   123......130.........140.........150.... .....160.........170.........180
 
   351........360.. .......370.........380.........390.........400.......
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Query Sequence  IHRDLRAANILV. . . SETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGVFT
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Template Sequence  VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ. KKMKERLGTAYYIAPEVLR. KKYD
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SGGGS
SSTT




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BTT.B
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   181........190.........200.........210..... ....220.........230.... ....
 
   408.410.........420.........430.........440...... ...450.........460....
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Query Sequence  IKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGY. . . RMPCPETCPPELYNDIIT
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Template Sequence  EKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA. KDLIK
Template Known Secondary structure  T.SS
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SGGGTTS
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   239240.........250..... ....260.........270.........280.........290. .....
 
   465....470.........480... ......490........
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Query Sequence  ECWRGRPEERPTFEFLQSV. . LEDFYTATEGQYELQ
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Template Sequence  QMLQFDSQRRISAQQALEHPWIKEMCSKKESLPSLA
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SSTTTS

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   297..300.........310.........320.........330..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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