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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank164Aligned Residues240
% Identity23%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.... .....260.........270.........280.........290.........300.
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Query Sequence  SGQFGEVWMGYY. KNNMKVAIKTLKEGTMSPEAFLGEANVMKTLQHERLVRLYAVVTREP
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Template Sequence  KEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIVRLHDSIQEES
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   16...20.........30.........40.. .......50.........60.........70..
 
   302.......310.........320.........330.........340.........350.........360
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Query Sequence  . IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIERMNSIHRDLRAANI
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Template Sequence  FHYLVFDLVTGGELFEDIVARE. . FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENL
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S
BS..S

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   84.....90.........100..... ....110.........120.........130.........140.
 
   361...... ..370.........380.........390.........400.........410.......
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Query Sequence  LVSETLC. . . CKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGVFTIKADVWSFGV
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Template Sequence  LLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG. YLSPEVLKKDPYSKPVDIWACGV
Template Known Secondary structure  S
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   142.......150.........160.........170....... ..180.........190.........200
 
   418.420.........430.........440.........450.. .......460.........470....
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Query Sequence  LLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPE. . . TCPPELYNDIITECWRGRPEER
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Template Sequence  ILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA. KSLIDSMLTVNPKKR
Template Known Secondary structure  .SS
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SST




TTGGGGS
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   201...... ..210.........220.........230.........240... ......250........
 
   475....480.........490..
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Query Sequence  PTFEFLQSVLEDFYTATE
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Template Sequence  ITADQALKV. . PWICNRE
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   259260....... ..270....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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