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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank161Aligned Residues266
% Identity31%Templatec3kexA_
PDB info PDB header:transferaseChain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250........ .260.........270 .........280.
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Query Sequence  EIPRQSLKLVRKLGSGQFGEVWMGYYKNNM. . . . . KVAIKTLKEGTM. . SPEAFLGEANV
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Template Sequence  IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA
Template Known Secondary structure  B

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   684.....690.........700.........710.........720.........730.........740...
 
   282.......290.........300.........310.........320.........330.........340.
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Query Sequence  MKTLQHERLVRLYAVVTREPIYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEG
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Template Sequence  IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVR. QHRGALGPQLLLNWGVQIAKG
Template Known Secondary structure  T


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TT
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   744.....750.........760.........770.........780. ........790.........800..
 
   342.......350.........360.........370.........380.........390.........400.
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Query Sequence  MAYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAI
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Template Sequence  MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLTP. . . IKWMALESI
Template Known Secondary structure  TT


S

SSTTSSSS

S
SGGGGS


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   803......810.........820.........830.........840.........850 .........
 
   402.......410.........420.........430.........440.........450.........460.
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Query Sequence  HFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYND
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Template Sequence  HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDV. YM
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   865....870.........880.........890.........900.........910.........920. ..
 
   462.......470.........480.........490.........
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Query Sequence  IITECWRGRPEERPTFEFLQSVLEDFYTATEGQYELQP
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Template Sequence  VMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKR
Template Known Secondary structure  T
S
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   924.....930.........940.........950.........960.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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