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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank185Aligned Residues237
% Identity29%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.... .....260........ .270.........280.........
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYY. KNNMKVAIKTLKEG. . TMSPEAFLGEANVMKTLQHER
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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TTT

B


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   74.....80.........90.........100.........110.........120.........130...
 
   290.........300. ........310.........320.........330.........340........
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Query Sequence  LVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIERM
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK. . RFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160........ .170.........180.........190..
 
   349350.........360.. .......370.........380.........390.........400.....
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Query Sequence  NSIHRDLRAANILV. . . SETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGV
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTTA. . . . . . . . . YYIAPEVLRGT
Template Known Secondary structure  T


S


GGGSSSSTT


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G.........GG

GGGGGT
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   193......200.........210.........220.........230.. .......240...
 
   406...410.........420.........430.........440...... ...450.........460..
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Query Sequence  FTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGY. . . RMPCPETCPPELYNDI
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Template Sequence  YDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA. KDL
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SGGGGGS
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   251........260......... 270.........280.........290.........300..... ...
 
   463......470.........480..
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Query Sequence  ITECWRGRPEERPTFEFLQS
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Template Sequence  IRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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