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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank98Aligned Residues249
% Identity29%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250..... ....260......... 270.........280.......
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYYK. NNMKVAIKTLKEGT. . . . MSPEAFLGEANVMKTLQH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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   74.....80.........90.........100.........110.........120.........130...
 
   288.290.........300. ........310.........320.........330.........340......
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Query Sequence  ERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIE
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI. . ILRQKFSEVDAAVIMKQVLSGTTYLH
Template Known Secondary structure  TTB


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   134.....140.........150.........160..... ....170.........180.........190.
 
   347..350.........360.. .......370.........380.........390.........400...
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Query Sequence  RMNSIHRDLRAANILV. . . SETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHF
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Template Sequence  KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF. . . . . . . . . . EVGTAYYIAPEVLR
Template Known Secondary structure  TT


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GGGSSS
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   192.......200.........210.........220....... ..230.........240.
 
   404.....410.........420.........430.........440...... ...450.........460
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Query Sequence  GVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGY. . . RMPCPETCPPELYN
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Template Sequence  KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA. K
Template Known Secondary structure  T


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   250.........260.........270 .........280.........290.........300...... .
 
   461........470.........480... ......490.....
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Query Sequence  DIITECWRGRPEERPTFEFLQSV. . LEDFYTATEGQY
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Template Sequence  QLVKLMLTYEPSKRISAEEALNHPWIVKFCSQVGKHA
Template Known Secondary structure  T
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   308.310.........320.........330.........340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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