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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank224Aligned Residues266
% Identity22%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250...... ...260....... ..270.........280...
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Query Sequence  WEIPRQSLKLVRKLGSGQFGEVWMGYYKN. NMKVAIKTLKE. . . GTMSPEAFLGEANVMK
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Template Sequence  LELQ. KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMK
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   4... ..10.........20.........30.........40.........50.........60..
 
   284.....290.........300. ........310.........
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Query Sequence  TLQHERLVRLYAVVTREP. IYIVTEYMARGCLLDFLK. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP
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   66...70.........80.........90.........100.........110.........120.....
 
   320.........330.........340.........350.........360......
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Query Sequence  . . . . . . . . . . . . . TDEGSRLSLPRLIDMSAQVAEGMAYIERMNSIHRDLRAANILVSETL
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Template Sequence  ECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK
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   126...130.........140.........150.........160.........170.........180.....
 
   367..370.........380.........390.........400.........410.........420......
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Query Sequence  CCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEIVTYG
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Template Sequence  SFEIKLVDFGLSKEFYKLNNGAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM. G
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   188.190.........200.........210.........220.........230.........240..... .
 
   427..430.........440..... ....450.........460.........470.........480...
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Query Sequence  RVPYPGMSNPEVIRSLEHG. . . YRMPCPETCPPELYNDIITECWRGRPEERPTFEFLQSV
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Template Sequence  AVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLA. RDLLSNLLNRNVDERFDAMRALQH
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   255....260.........270.........280......... 290.........300.........310...
 
   484.....490........
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Query Sequence  LEDFYTATEGQYELQ
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Template Sequence  . . PWISQFSDKIYKM
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   314.....320......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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