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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank181Aligned Residues271
% Identity13%Templatec3e7eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitotic checkpoint serine/threonine-protein kinase bub1; PDBTitle: structure and substrate recruitment of the human spindle checkpoint2 kinase bub
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250.........260.........270.....
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Query Sequence  NLAPKNLWAQDEWEIPRQSLKLVRKLGSGQFGEVWMGYYKNNMKVAIKTLKEGTMSPEAF
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Template Sequence  QCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQ. NKQKFVLKVQKPANPWEFYI
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   768.770.........780.........790.........800...... ...810.........820......
 
   276...280. ........290.........300. ........310......... 320.........330
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Query Sequence  LGEANV. MKTLQHERLVRLYAVVTREP. IYIVTEYMARGCLLDFLK. . . TDEGSRLSLPR
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Template Sequence  GTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGL
Template Known Secondary structure  S
GGGGGGB


SS




S
BTSTT
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   834.....840.........850.........860.........870.........880.........890...
 
   331........340.........350.........360.. .......370.........380 ...
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Query Sequence  LIDMSAQVAEGMAYIERMNSIHRDLRAANILV. . . . . SETLCCKIADFGLARIID. . SEY
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Template Sequence  VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQSAGLALIDLGQSIDMKLFPKG
Template Known Secondary structure  TTT



SGGG
GGGT


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GGGS
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   894.....900.........910.........920.........930.........940.........950...
 
   384.....390.........400.........410.........420.........430.........440...
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Query Sequence  TAQEGAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLE
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Template Sequence  TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF. GTYMKVKNEGGE. . . . . .
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   960.........970.........980.........990.........1000 .........1010..
 
   444.....450.........460.........470.... .....480.........490....
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Query Sequence  HGYRMPCPETCPPELYNDIITECWRGRPEER. PTFEFLQSVLEDFYTATEGQ
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Template Sequence  CKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTN
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   1013......1020.........1030.........1040.........1050.........1060....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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