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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank235Aligned Residues233
% Identity25%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250..... ....260...... ...270.........280.......
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYYK. NNMKVAIKTLK. . . . EGTMSPEAFLGEANVMKTLQH
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN
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TTTTT

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   37..40.........50.........60.........70.........80.........90......
 
   288.290.........300. ........310.........320.........330.........340......
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Query Sequence  ERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIE
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Template Sequence  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK. . AVTEPEARYFMRQTIQGVQYLH
Template Known Secondary structure  TTB


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   97..100.........110.........120.........130.. .......140.........150....
 
   347..350.........360.........370.........380.........390.........400......
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Query Sequence  RMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGVF
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Template Sequence  NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . . . . . . . . . . . . . . . . . . . . . H
Template Known Secondary structure  TT




GGG
TT




TT

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   155....160.........170.........180....... .
 
   407..410.........420.........430.........440.........450.........460......
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Query Sequence  TIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYNDIITEC
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Template Sequence  SFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVA. SALIRRM
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T.SS
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   215....220.........230.. .......240.........250... ......260.... .....270.
 
   467..470.........480.........490........
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Query Sequence  WRGRPEERPTFEFLQSVLEDFYTATEGQYELQ
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Template Sequence  LHADPTLRPSVAELLTD. . EFFTSGYAPMRLP
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SSGGGS

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   272.......280........ .290.........300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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