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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank236Aligned Residues246
% Identity22%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260.........270.. .......280..
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Query Sequence  DEWEIPRQSLKLVRKLGSGQFGEVWMGYYKNNMKVAIKTLKEGTMSP. . . EAFLGEANVM
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Template Sequence  QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL
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TT

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   516...520.........530.........540.........550.........560.........570.....
 
   283... ...290.........300. ........310.........320.........330.........
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Query Sequence  KTLQ. . HERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVA
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Template Sequence  NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK. . . SIDPWERKSYWKNML
Template Known Secondary structure  GGG
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   576...580.........590.........600.........610....... ..620.........630..
 
   340.........350.........360.........370.........380.........390.........
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Query Sequence  EGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPE
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Template Sequence  EAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . . . . . . . . . . . NQGTVNYMPPE
Template Known Secondary structure  TT






GGGT.T


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   633......640.........650....... ..660........ .670.........
 
   400... ......410.........420.........430.. .......440..... ....450......
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Query Sequence  AIHF. GVFTIKADVWSFGVLLMEIVTYGRVPYPG. MSNPEVIRSLEHG. YRMPCPETCPP
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Template Sequence  AIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK
Template Known Secondary structure  TT




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   694.....700.........710......... 720.........730.........740.........750..
 
   457..460.........470.........480.........490.
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Query Sequence  ELYNDIITECWRGRPEERPTFEFLQSVLEDFYTAT
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Template Sequence  DL. QDVLKCCLKRDPKQRISIPELLAH. . PYVQIQ
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   763. .....770.........780........ .790....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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