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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank110Aligned Residues237
% Identity22%Templatec2wqmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250...... ...260.........270. ........280.......
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYYKN. NMKVAIKTLKEGTMS. . . . PEAFLGEANVMKTLQH
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Template Sequence  ANFRIEKKIGRG. . SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH
Template Known Secondary structure  GG

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   32.......40... ......50.........60.........70.........80.........
 
   288.290.........300. ........310......... 320.........330.........340....
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Query Sequence  ERLVRLYAVVTREP. IYIVTEYMARGCLLDFLK. . TDEGSRLSLPRLIDMSAQVAEGMAY
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Template Sequence  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH
Template Known Secondary structure  TTB

TT


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   92.......100.........110.........120.........130.........140.........150.
 
   345....350.........360.........370.........380.........390.........400....
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Query Sequence  IERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFG
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Template Sequence  MHSRRVMHRDIKPANVFITATGVVKLGDL. . . . . . . . . . . . . . . . . . TPYYMSPERIHEN
Template Known Secondary structure  TT






GGG
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   152.......160.........170.........180 .........190...
 
   405....410.........420.........430.........440.........450.........460....
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Query Sequence  VFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYNDIIT
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Template Sequence  GYNFKSDIWSLGCLLYEMAA. LQSPFYMNLYSLCKKIEQCDYPPLPSDHYSEEL. RQLVN
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   212.......220.........230. ........240.........250.........260.... .....
 
   465....470.........480.........490.
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Query Sequence  ECWRGRPEERPTFEFLQSVLEDFYTAT
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Template Sequence  MCINPDPEKRPDVTYVYDVAKRMHACT
Template Known Secondary structure  T
SSGGGS

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   273......280.........290.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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