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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank122Aligned Residues232
% Identity21%Templatec2pziA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250..... ....260.........270.. .......280........
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYYK. . NNMKVAIKTLKEGTMSP. . EAFLGEANVMKTLQHE
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Template Sequence  GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHP
Template Known Secondary structure  TTTTGGGTTS
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GGGGG


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   149150.........160.........170.........180.........190.........200........
 
   289290.........300. ........310.........320.........330.........340..
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Query Sequence  RLVRLYAVVTREP. . . . . . IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGM
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Template Sequence  SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL. . . . . . . . KQKLPVAEAIAYLLEILPAL
Template Known Secondary structure  TB


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   209210.........220.........230.........240 .........250.........260
 
   343......350.........360.........370.........380.........390.........400..
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Query Sequence  AYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIH
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Template Sequence  SYLHSIGLVYNDLKPENIMLT. EEQLKLIDLGAVSRINSF. . . . GYLYGTPGFQAPEIVR
Template Known Secondary structure  TT



SGGG
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   265....270.........280..... ....290.........300... ......310.........
 
   403......410.........420.........430.........440.........450.........460..
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Query Sequence  FGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYNDI
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Template Sequence  TGP. TVATDIYTVGRTLAALTL. DLPTRNGRYV. . . . . . . . DGLPEDDPVLKTYDSYGRL
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   320.. .......330.........340 .........350 .........360.........
 
   463......470.... .....480.......
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Query Sequence  ITECWRGRPEER. PTFEFLQSVLEDF
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Template Sequence  LRRAIDPDPRQRFTTAEEMSAQLTGV
Template Known Secondary structure  T
SSGGGS
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   370.........380.........390.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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