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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank183Aligned Residues244
% Identity25%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250...... ...260...... ...270.........280..... .
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Query Sequence  QSLKLVRKLGSGQFGEVWMGYYKN. NMKVAIKTLK. . . . EGTMSPEAFLGEANVMKTL. Q
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK
Template Known Secondary structure  TTTTTTSS
T
T
TT
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   340.........350.........360.........370.........380.........390.........
 
   287..290.........300. ........310.........320.........330.........340.....
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Query Sequence  HERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYI
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Template Sequence  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. . RFKEPHAVFYAAEIAIGLFFL
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TTB

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   400.........410.........420.........430...... ...440.........450.......
 
   346...350.........360.........370.........380.........390.........400.....
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Query Sequence  ERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEAIHFGV
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Template Sequence  QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD. GVTTKFCGTPDYIAPEIIAYQP
Template Known Secondary structure  TT
B



SGGG
TTS



TT
B
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T.T

B


S
TTT

TT

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   458.460.........470.........480.........490.... .....500.........510......
 
   406...410.........420.........430.........440.........450.........460.....
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Query Sequence  FTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYNDIITE
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Template Sequence  YGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKEA. VAICKG
Template Known Secondary structure  B
T.SS
SS

SS
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   518.520.........530...... ...540.........550...... ...560........ .570....
 
   466...470...... ...480..
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Query Sequence  CWRGRPEERPT. . . . . FEFLQS
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Template Sequence  LMTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  SS
SSGGGSTT
STTT
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   575....580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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