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Job DescriptionP16277
Confidence99.88%DateTue Jul 30 13:14:40 BST 2013
Rank373Aligned Residues130
% Identity25%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150
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Query Sequence  ARSLVTGREGYVPSNFVAPVETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESN
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Template Sequence  GSSGSSGKAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESILANR. . SDGTFLVRQRVKD
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S


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GGGSSSB

S

TTTS..
TT

SST
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   1........10.........20.........30.........40..... ....50........
 
   151........160.........170.........180.........190.........200... ..
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Query Sequence  KGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKG. . . . . DG
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Template Sequence  AAEFAISIK. . . . YNVEVKHIKIMTAE. GLYRITEKKAFRGLTELVEFYQQNSLKDCFKS
Template Known Secondary structure  T


....TT
T.TSSTT

BSSTTS
GGGT
TT
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   5960....... ..70.........80. ........90.........100.........110...
 
   206...210.........220.......
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Query Sequence  LCQKLTLPCVNLAPKNLWAQDE
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Template Sequence  LDTTLQFPFKEPEKRTISRSGP
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   114.....120.........130.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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