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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank81Aligned Residues247
% Identity25%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.... .....260....... ..270.........280.
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Query Sequence  EWEIPRQSLKLVRKLGSGQFGEVWMGYY. KNNMKVAIKTLKE. . . . GTMSPEAFLGEANV
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI
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G..GG
SSTTT

TT
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   127..130 .........140.........150.........160.........170.........180....
 
   282.......290.........300. ........310.........320.........330.........340
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Query Sequence  MKTLQHERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAE
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Template Sequence  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS. . KFDEQRTATYITELAN
Template Known Secondary structure  TT


TTB


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TT
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   185....190.........200.........210.........220...... ...230.........240..
 
   341........350.........360.........370.........380.........390.........400
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Query Sequence  GMAYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPEA
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Template Sequence  ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . . . . . . . . . . . VTLDYLPPEM
Template Known Secondary structure  TTT




GGG
TTS

S

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GGG

GGG
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   243......250.........260.........270........ .280........
 
   401........410.........420.........430.........440.........450.........460
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Query Sequence  IHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYN
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Template Sequence  IEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGA. R
Template Known Secondary structure  TTTTSSGGG.SS
TT

SSTT.




TTS
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   301........310.........320.... .....330.........340.... .....350...... .
 
   461........470.........480.........490......
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Query Sequence  DIITECWRGRPEERPTFEFLQSVLEDFYTATEGQYE
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Template Sequence  DLISRLLKHNPSQRPMLREVLEH. . PWITANSSKPS
Template Known Secondary structure  S
SSGGGS

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   358.360.........370.........380 .........390.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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