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Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank68Aligned Residues263
% Identity35%Templatec1yvjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase jak3; PDBTitle: crystal structure of the jak3 kinase domain in complex with2 a staurosporine analogue
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250..... ....260.........270. ........280
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Query Sequence  EWEIPRQSLKLVRKLGSGQFGEVWMGYYK. . . . . NNMKVAIKTLKEGTMS. PEAFLGEAN
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Template Sequence  PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQ
Template Known Secondary structure 

B

GGG
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SSSSS
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   814.....820.........830.........840.........850.........860.........870...
 
   281........290.........300. ........310.........320.........330.......
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Query Sequence  VMKTLQHERLVRLYAVVTREP. . . IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQ
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Template Sequence  ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRH. RARLDASRLLLYSSQ
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TTB




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TT
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   874.....880.........890.........900.........910....... ..920.........930..
 
   338.340.........350.........360.........370....... ..380.........390......
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Query Sequence  VAEGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLAR. IIDSEYTAQEGAKFPIKWT
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Template Sequence  ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDVVREPGQSPIFWY
Template Known Secondary structure  TT
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GGGTT


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TT



SS

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   933......940.........950.........960.........970.........980.........990..
 
   397..400.........410.........420.........430... ......440.
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Query Sequence  APEAIHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGM. . . . . . . . . . . . . . . SNPEVIRS
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Template Sequence  APESLSDNIFSRQSDVWSFGVVLYELFT. YCDKSCSPSAEFLRMMGCERDVPALCRLLEL
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   995....1000.........1010.........1020.. .......1030.........1040.........1050...
 
   442.......450.........460.........470.........480.........490..
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Query Sequence  LEHGYRMPCPETCPPELYNDIITECWRGRPEERPTFEFLQSVLEDFYTATE
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Template Sequence  LEEGQRLPAPPACPAEV. HELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR
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TT

.T
SSGGGS

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   1054.....1060.........1070 .........1080.........1090.........1100...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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