Return to main results Retrieve Phyre Job Id

Job DescriptionP16277
Confidence100.00%DateTue Jul 30 13:14:40 BST 2013
Rank46Aligned Residues248
% Identity21%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250...... ...260..... ....270.........280
Predicted Secondary structure 











.

.......





Query SS confidence 



























.








. . . . . . .














Query Sequence  EIPRQSLKLVRKLGSGQFGEVWMGYYKN. NMKVAIKTL. . . . . . . KEGTMSPEAFLGEAN
Query Conservation   
          

 
 

 
  
    .   



 
.......         
  
  
Alig confidence 



























.








.......














Template Conservation       

     

 
 

 

      

   


 
 
              
     
Template Sequence  HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS
Template Known Secondary structure 


GGG
SSSTTT

TT
Template Predicted Secondary structure 

















Template SS confidence 



























































   185....190.........200.........210.........220.........230.........240....
 
   281........290.........300. ........310.........320.........330.........
Predicted Secondary structure 







.












Query SS confidence 




















.





































Query Sequence  VMKTLQHERLVRLYAVVTREP. IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVA
Query Conservation 

  
 
 


 
 
      .  

 
    
 
   
               
  


Alig confidence 




















.




















..














Template Conservation   
    

 

 
           



   

 
   
    .. 
 
        

 
Template Sequence  LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG. . VFSEADMRFYAAEII
Template Known Secondary structure  SSS

SSB

TT


S
B
..S

Template Predicted Secondary structure 















..


Template SS confidence 



























































   245....250.........260.........270.........280....... ..290.........300..
 
   340.........350.........360.........370.........380.........390.........
Predicted Secondary structure 











































Query SS confidence 



























































Query Sequence  EGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLARIIDSEYTAQEGAKFPIKWTAPE
Query Conservation   

 


    

 

   


       

 




                    


Alig confidence 













































..











Template Conservation    
  

   







 



     


 


 
         ..   

  
 


Template Sequence  LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH. . ASVGTHGYMAPE
Template Known Secondary structure  TT




GGG
TTS



TT

SS



..


S
TTS

Template Predicted Secondary structure 























..






Template SS confidence 



























































   303......310.........320.........330.........340........ .350.........360
 
   400..... ....410.........420.........430.. .......440.........450......
Predicted Secondary structure 


.









..













Query SS confidence 





.


























. .























Query Sequence  AIHFGV. FTIKADVWSFGVLLMEIVTYGRVPYPG. . MSNPEVIRSLEHGYRMPCPETCPP
Query Conservation   
    . 
 





 



 

 
 
  
   ..         
  
 
   
     
Alig confidence 





.


















.






..























Template Conservation              
 



 





 .
  

                      
   
 
Template Sequence  VLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP
Template Known Secondary structure  SSS



T.SS
SS
SS
SS
T





TTS
Template Predicted Secondary structure 






.























Template SS confidence 



























































   361........370.........380...... ...390.........400.........410.........
 
   457..460.........470..... ....480..
Predicted Secondary structure 





.....
Query SS confidence 


















. . . . .






Query Sequence  ELYNDIITECWRGRPEERP. . . . . TFEFLQS
Query Conservation       
   
   

  

.....
   
  
Alig confidence 

.















.....






Template Conservation    .  

  

  

  


        
  
Template Sequence  EL. RSLLEGLLQRDVNRRLGCLGRGAQEVKE
Template Known Secondary structure  .

SSSTTSTTTSSSS
Template Predicted Secondary structure  .












Template SS confidence 






























   420. ........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D