Return to main results Retrieve Phyre Job Id

Job DescriptionP16277
Confidence99.64%DateTue Jul 30 13:14:40 BST 2013
Rank423Aligned Residues78
% Identity13%Templatec1x6bA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine exchange factor (gef) 16; PDBTitle: solution structures of the sh3 domain of human rho guanine2 exchange factor (gef) 16
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.......
Predicted Secondary structure 










































Query SS confidence 



























































Query Sequence  FNHLAPPSPNQDPDEEERFVVALFDYAAVNDRDLQVLKGEKLQVLRSTGDWWLARSLVTG
Query Conservation        
              
          

    
    
      

       
Alig confidence 



























































Template Conservation 



               
 
   
 
   



   

 
 
      

       
Template Sequence  GSSGSSGWQGLSSKGDLPQVEITKAFFAKQADEVTLQQADVVLVLQQEDGWLYGERLRDG
Template Known Secondary structure 





S






SS

SS




SSSB



TTTTTTT
Template Predicted Secondary structure 









































Template SS confidence 



























































   1........10.........20.........30.........40.........50.........60
 
   98.100.........110.....
Predicted Secondary structure 













Query SS confidence 

















Query Sequence  REGYVPSNFVAPVETLEV
Query Conservation    
  
   
     

 
Alig confidence 

















Template Conservation    
 

 



 
    
Template Sequence  ETGWFPEDFARFISGPSS
Template Known Secondary structure 

GGG
SS

Template Predicted Secondary structure 






Template SS confidence 

















   61........70........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D