Return to main results Retrieve Phyre Job Id

Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank132Aligned Residues250
% Identity38%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410...... ...420......... 430.........
Predicted Secondary structure 







....





....
Query SS confidence 




























. . . .












. . . .









Query Sequence  LKREEITLLKELGNGQFGVVQLGQWKGQY. . . . DVAVKMIKEGAMS. . . . EDEFFQEAQT
Query Conservation 
          

 
 

 
         .... 



        ....      
   
Alig confidence 




























....












....









Template Conservation 
    
     

 
 

 

             



 
                
   
Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA
Template Known Secondary structure 

GGG



B

TTS
TTS


S



S
Template Predicted Secondary structure 
















Template SS confidence 



























































   121........130.........140.........150.........160.........170.........180
 
   440.........450.........460.........470.........480.........490.........
Predicted Secondary structure 





















Query SS confidence 



























































Query Sequence  MMKLSHPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEG
Query Conservation 
  
 
 


 
           

 
    
 
   
                  
   
Alig confidence 

















.








































Template Conservation 
  
 




        .     
      
 
                          
Template Sequence  MHSLDHRNLIRLYGVVLT. PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG
Template Known Secondary structure  T


TTB


S.SS



SS
BSTT
S
Template Predicted Secondary structure 










.






























Template SS confidence 



























































   181........190........ .200.........210.........220.........230.........
 
   500.........510.........520.........530.........540.........550.........
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  MAFLESHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV
Query Conservation 
  

    

 

   



      

 


                       


 
Alig confidence 


































...........













Template Conservation                                     ...........              
Template Sequence  MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . . . RALPVPFAWCAPES
Template Known Secondary structure  TT


S

SGGGSSSS


TT...........



GGG

Template Predicted Secondary structure 






























...........













Template SS confidence 



























































   240.........250.........260.........270.... .....280........
 
   560.........570.........580.........590.........600.... .....610........
Predicted Secondary structure 
















.









Query SS confidence 












































.













Query Sequence  FHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQG. HRLYRPQLASDTIY
Query Conservation           




 
  
 

 
 
  
            
   .     
        
Alig confidence 












































.













Template Conservation           














 
  

           
                
 
Template Sequence  LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY
Template Known Secondary structure 



TTT

TTTT

TS






TTS
Template Predicted Secondary structure 




























Template SS confidence 



























































   302.......310.........320.........330.........340.........350.........360.
 
   619620.........630.........640.........
Predicted Secondary structure 







Query SS confidence 






























Query Sequence  QIMYSCWHELPEKRPTFQQLLSAIEPLREQD
Query Conservation   

  
    
  


   
   
       
Alig confidence 






























Template Conservation   

   
   
  


   

  
       
Template Sequence  NVMVQCWAHKPEDRPTFVALRDFLLEAQPTD
Template Known Secondary structure  T
SSGGGS

T


Template Predicted Secondary structure 









Template SS confidence 






























   362.......370.........380.........390..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D