Job Description P97504 Confidence 99.65% Date Wed Jul 10 14:16:15 BST 2013 Rank 398 Aligned Residues 104 % Identity 16% Template c4gmvB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:ras-associated and pleckstrin homology domains-containing PDBTitle: crystal structure of the coiled-coil, ra and ph domains of2 lamellipodin Resolution 2.40 Å

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Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	L	E	E	L	L	L	K	K	S	Q	Q	K	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	K	T	S	L	S	Y	Y	E	Y	D	K	M	K	R	G	S	R	K	G	S	I	E	I	K	K	I	R	C	V	E
Query Conservation
Alig confidence																	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		P	E	I	E	G	V	L	W	L	K	D	D	G	K	K	.	.	.	.	.	S	W	K	K	R	Y	F	L	L	R	A	S	G	I	Y	Y	V	P	.	.	.	.	.	.	.	D	L	V	C	F	L	Q	L	D	H	V	N	V	Y	Y
Template Known Secondary structure													T	T	S	S	.	.	.	.	.											S	S							.	.	.	.	.	.	.								G	G	G
Template Predicted Secondary structure																	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.						.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.								430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		K	V	N	L	E	E	Q	T	P	V	E	R	Q	Y	P	F	Q	I	V	Y	.	.	.	.	.	.	K	D	G	L	L	Y	V	Y	A	S	N	E	E	S	R	C	Q	W	L	K	A	L	Q	K	E	I	R	G	N	P	H	L	L	I
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																								.
Template Conservation																																																			.
Template Sequence		G	Q	D	Y	R	N	K	Y	K	A	P	T	D	Y	C	L	V	L	K	H	P	Q	I	Q	K	K	S	Q	Y	I	K	Y	L	C	C	D	D	V	R	T	L	H	Q	W	V	N	G	I	R	.	I	A	K	Y	G	K	Q	L	Y	M
Template Known Secondary structure				S					S			S	S	S								T	T			S			T	T	S						S	S													.					T
Template Predicted Secondary structure																																																			.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.
		119	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		512	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D