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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank274Aligned Residues245
% Identity19%Templatec4f9bC_
PDB info PDB header:transferase/transferase inhibitorChain: C: PDB Molecule:cell division cycle 7-related protein kinase; PDBTitle: human cdc7 kinase in complex with dbf4 and pha767491
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.........430.........440... ..
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. . . . GQYDVAVKMIKEGAMSEDEFFQEAQTMMKL. SH
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Template Sequence  NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS. HPIRIAAELQCLTVAGGQ
Template Known Secondary structure  GT
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TTS

TTS.
T
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   56...60.........70.........80.........90...... ...100.........110....
 
   446...450.........460.........470.........480.........490.........500.....
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Query Sequence  PKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLES
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Template Sequence  DNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL. . . . NSLSFQEVREYMLNLFKALKRIHQ
Template Known Secondary structure  TTB


STT





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   115....120.........130.........140...... ...150.........160.........170
 
   506...510.........520... ......530.........540. ........550........
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Query Sequence  HQFIHRDLAARNCLVDSD. LSVKVSDFGMTRYVLDDQ. . . . . . YVSSVGTKFPVKWSAPE
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Template Sequence  FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQRAGTPGFRAPE
Template Known Secondary structure  TT
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SGGGTTTT

GGG

TT
S
GGGGG


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GGG

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   171........180.........190.........200.........210.........220.........230
 
   559560.... .....570.........580.........590.........600...
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Query Sequence  VFHYFK. YSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQ. . . . . . . . . . . . . .
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Template Sequence  VLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTF
Template Known Secondary structure  TT
S


T

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T
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   384.....390.........400.........410.........420.........430.........440...
 
   604.....610.........620.........630.........640
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Query Sequence  . . . . . . . . . . . . . . . . . . GHRLYRPQLASDTIYQIMYSCWHELPEKRPTFQQLLS
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Template Sequence  GKSILCSKEVPAQDLRKLCERLRGWNEVPDEAYDLLDKLLDLNPASRITAEEALL
Template Known Secondary structure  T




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TT


T
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   444.....450.........460.........470.........480.........490........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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