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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank275Aligned Residues242
% Identity21%Templatec4e7wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glycogen synthase kinase 3; PDBTitle: structure of gsk3 from ustilago maydis
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   393......400.........410.........420.........430.........440.........450..
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Query Sequence  ITLLKELGNGQFGVVQLGQWKGQYDVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLVKFY
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Template Sequence  YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF. . . KNRELQIMRIVKHPNVVDLK
Template Known Secondary structure  TTTTT

TTS...

T


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   38.40.........50.........60.........70.... .....80.........90....
 
   453.... ..460.........470........ .480.........490.........500....
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Query Sequence  GVCSK. . . . . . KYPIYIVTEYITNGCLLNYLK. . SHGKGLESCQLLEMCYDVCEGMAFLE
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Template Sequence  AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH
Template Known Secondary structure  SSSSS


STTS


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   95....100.........110.........120.........130.........140.........150....
 
   505....510.........520. ........530.........540.........550.........560...
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Query Sequence  SHQFIHRDLAARNCLVD. SDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF
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Template Sequence  SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSICSRY. . YRAPELIFGAT
Template Known Secondary structure  TT
S

SGGGTTTT


TT


TT







GG..G

TT
S
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   155....160.........170.........180.........190.........200. ........210..
 
   564.....570.........580.........590.........600.........
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Query Sequence  KYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYR. . . . . . . . . . . . . .
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Template Sequence  NYTTNIDIWSTGCVMAELMQ. GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH
Template Known Secondary structure  S

T.SS
SS

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GGGSSS
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   214.....220.........230... ......240.........250.........260.........270..
 
   610.........620.........630.........640
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Query Sequence  . . . . . . . . . . . . . . PQLASDTIYQIMYSCWHELPEKRPTFQQLLS
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Template Sequence  KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC
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S
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SSGGGS

T
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   273......280.........290.........300.........310.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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