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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank245Aligned Residues237
% Identity23%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.... .....430.........440... .
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIK. . . . EGAMSEDEFFQEAQTMMKL. S
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   445....450.........460.........470.........480.........490.........500....
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Query Sequence  HPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLE
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR. FDEARARFYAAEIISALMFLH
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   413......420.........430.........440.........450 .........460.........470.
 
   505....510.........520.........530.........540.........550.........560....
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Query Sequence  SHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK
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Template Sequence  DKGIIYRDLKLDNVLLDHEGHCKLADFGM. . . . . . . . . . CKEGICGTPDYIAPEILQEML
Template Known Secondary structure  TT
B




GGG
TTS



TT..........
B
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GGG

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   472.......480.........490.........500 .........510.........520.
 
   565....570.........580.........590.........600.........610.........620....
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Query Sequence  YSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRPQLASDTIYQIMYSC
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Template Sequence  YGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILN. DEVVYPTWLHEDATGILKSF
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TT.SS
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   531........540......... 550.........560........ .570.........580........
 
   625....630.... .....640
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Query Sequence  WHELPEKRPT. . . . . . FQQLLS
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Template Sequence  MTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
TT
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   589590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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