Job Description P97504 Confidence 99.67% Date Wed Jul 10 14:16:15 BST 2013 Rank 386 Aligned Residues 109 % Identity 19% Template c3tcaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member PDBTitle: crystal structure of the ras-associating and pleckstrin-homology2 domains of riam Resolution 2.35 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		L	E	E	L	L	L	K	K	S	Q	Q	K	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	K	T	S	L	S	Y	Y	E	Y	D	K	M	K	R	G	S	R	K	.	G	S	I	E	I	K	K	I	R	C	V	E	K
Query Conservation																																																.
Alig confidence															.	.	.	.	.																													.
Template Conservation															.	.	.	.	.
Template Sequence		L	E	G	A	L	Y	L	K	E	D	G	K	K	.	.	.	.	.	S	W	K	R	R	Y	F	L	L	R	A	S	G	I	Y	Y	V	P	K	G	K	T	K	T	S	R	D	L	A	C	F	I	Q	F	E	N	V	N	I	Y	Y	G
Template Known Secondary structure											T	T	S	S	.	.	.	.	.											S	S							T	T			S	S	T	T	T							G	G	G
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		V	N	L	E	E	Q	T	P	V	E	R	Q	Y	P	F	Q	I	V	Y	K	D	G	L	.	.	.	.	.	.	L	Y	V	Y	A	S	N	E	E	S	R	C	Q	W	L	K	A	L	Q	K	E	I	R	G	N	P	H	L	L	I	K
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																				.
Template Conservation																																																		.
Template Sequence		I	Q	C	K	M	K	Y	K	A	P	T	D	H	C	F	V	L	K	H	P	Q	I	Q	K	E	S	Q	Y	I	K	Y	L	C	C	D	D	A	R	T	L	S	Q	W	V	M	G	I	R	.	I	A	K	Y	G	K	T	L	Y	D	N
Template Known Secondary structure			S								S	S	S								T	T			S			T	T	S						S	S													.					T
Template Predicted Secondary structure																																																		.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.
		120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D