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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank42Aligned Residues239
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410... ......420.........430.........440.........450...
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Query Sequence  LLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLVKFYG
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Template Sequence  YFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFD
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   57..60.........70.........80.........90 .........100.........110....
 
   454.....460.........470.........480.........490.........500.........510...
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Query Sequence  VCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESHQFIHRDL
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Template Sequence  VFEDKKYFYLVTEFYEGGELFEQIINRHK. FDECDAANIMKQILSGICYLHKHNIVHRDI
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   133......140.........150.........160. ........170.........180.........190.
 
   514.....520 .........530.........540.........550.........560.........570
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Query Sequence  AARNCLV. . . DSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD
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Template Sequence  KPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAYYIAPEVLKK. KYNEKCD
Template Known Secondary structure  SGGGSSTT

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   192.......200.........210.........220....... ..230.........240. .......
 
   571........580.........590.........600.........610. ........620.......
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Query Sequence  VWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRPQ. . . LASDTIYQIMYSCWHE
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Template Sequence  VWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTY
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   249250.........260. ........270.........280.........290.........300.......
 
   628.630.........640
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Query Sequence  LPEKRPTFQQLLS
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Template Sequence  DYNKRCTAEEALN
Template Known Secondary structure  STTTS

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   308.310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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