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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank63Aligned Residues240
% Identity25%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.........430.........440.........
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLV
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIM
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   60.........70.. .......80.........90..... ....100.........110....
 
   450.........460.........470.........480.........490.........500.........
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Query Sequence  KFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESHQFI
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Template Sequence  KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK. FNEVDAAVIIKQVLSGVTYLHKHNIV
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BSS.

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   123......130.........140.........150..... ....160.........170.........180.
 
   510.........520 .........530.........540.........550.........560......
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Query Sequence  HRDLAARNCLV. . . DSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS
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Template Sequence  HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER. . LGTAYYIAPEVLRK. KYD
Template Known Secondary structure 
S

SGGGS
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BTTB
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   182.......190.........200.........210.........220. ........230..... ...
 
   567..570.........580.........590.........600..... ....610.........620...
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Query Sequence  SKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGH. . . RLYRPQLASDTIYQIMYS
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Template Sequence  EKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ
Template Known Secondary structure  T.SS
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SGGGTTS
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   239240.........250..... ....260.........270.........280.........290.......
 
   624.....630.........640
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Query Sequence  CWHELPEKRPTFQQLLS
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Template Sequence  MLQFDSQRRISAQQALE
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SSTTTS

T
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   298.300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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