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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank179Aligned Residues238
% Identity25%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.... .....430.........440.......
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIK. . EGAMSEDEFFQEAQTMMKLSHPK
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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TTT

B


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   74.....80.........90.........100.........110.........120.........130...
 
   448.450.........460.........470.........480.........490.........500.......
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Query Sequence  LVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESHQ
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR. FSEHDAARIIKQVFSGITYMHKHN
Template Known Secondary structure  B


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   135....140.........150.........160......... 170.........180.........190...
 
   508.510.........520 .........530.........540.........550.........560....
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Query Sequence  FIHRDLAARNCLV. . . DSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK
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Template Sequence  IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTT. . . . . . . . . . AYYIAPEVLRGT
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S


GGGSSSSTT


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..........GGG

GGGGGT
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   194.....200.........210.........220.........230. ........240...
 
   565....570.........580.........590.........600.... .....610.........620.
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Query Sequence  YSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQG. . . HRLYRPQLASDTIYQIM
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Template Sequence  YDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
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SGGGGGS
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   251........260......... 270.........280.........290.........300.........
 
   622.......630.........640
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Query Sequence  YSCWHELPEKRPTFQQLLS
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Template Sequence  RKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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