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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank95Aligned Residues237
% Identity26%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420....... ..430.........440.....
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGA. . . . MSEDEFFQEAQTMMKLSH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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GGG
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   74.....80.........90.........100.........110.........120.........130...
 
   446...450.........460.........470.........480.........490.........500.....
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Query Sequence  PKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLES
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK. FSEVDAAVIMKQVLSGTTYLHK
Template Known Secondary structure  TTB


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   134.....140.........150.........160.........170 .........180.........190..
 
   506...510.........520 .........530.........540.........550.........560..
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Query Sequence  HQFIHRDLAARNCLV. . . DSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY
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Template Sequence  HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGTA. . . . . . . . . . . YYIAPEVLR
Template Known Secondary structure  TT


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GGGSSS
TT


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TTT


G...........GG

T
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   193......200.........210.........220.........230.. .......240.
 
   563......570.........580.........590.........600.........610 .........
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Query Sequence  FKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRP. . . QLASDTIYQ
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Template Sequence  KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ
Template Known Secondary structure  T


T.SS
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TTTTTTS
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   250.........260.........270 .........280.........290.........300........
 
   620.........630.........640
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Query Sequence  IMYSCWHELPEKRPTFQQLLS
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Template Sequence  LVKLMLTYEPSKRISAEEALN
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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