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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank221Aligned Residues256
% Identity21%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   390.........400.........410... ......420..... ....430.........440.....
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Query Sequence  REEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKE. . . GAMSEDEFFQEAQTMMKLSH
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHH
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   7..10.........20.........30.........40.........50.........60......
 
   446...450.........460.........470.........480..
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Query Sequence  PKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGK. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE
Template Known Secondary structure  TTB


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   70.........80.........90.........100.........110.........120.........
 
   483......490.........500.........510.........520.... ..
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Query Sequence  . . . . . . . . . . . . . . GLESCQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDSDL. . SV
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Template Sequence  EAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI
Template Known Secondary structure  S




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   130.........140.........150.........160.........170.........180.........
 
   527..530.........540.........550.........560 .........570.........580....
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Query Sequence  KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF. . HYFKYSSKSDVWAFGILMWEVFSL
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Template Sequence  KLVDFGLSKEFYKLNNGAGT. . . . . PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM.
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GGGTT




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   192.......200.........210. ........220.........230.........240.....
 
   585....590.........600.... .....610.........620.........630.........640
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Query Sequence  GKQPYDLYDNSEVVVKVSQG. . . HRLYRPQLASDTIYQIMYSCWHELPEKRPTFQQLLS.
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Template Sequence  GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH
Template Known Secondary structure  SS
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TTSGGGGGS
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   254.....260.........270.........280.........290.........300.........310...
 
   641........650.
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Query Sequence  . AIEPLREQDKP
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Template Sequence  PWISQFSDKIYK
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   314.....320.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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