Job Description P97504 Confidence 100.00% Date Wed Jul 10 14:16:15 BST 2013 Rank 24 Aligned Residues 275 % Identity 37% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.							.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		V	P	V	S	V	A	L	G	S	G	I	W	E	L	K	R	E	E	I	T	L	L	K	E	L	G	N	G	Q	F	G	V	V	Q	L	G	Q	W	K	.	.	.	.	.	.	G	Q	Y	D	V	A	V	K	M	I	K	E	G	A	M
Query Conservation																																									.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	P	T	Q	L	P	Y	D	H	K	W	E	F	P	R	N	R	L	S	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	H
Template Known Secondary structure				G	G	G	S				G	G	G	B			G	G	G											S	S										S	S	S	S	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
		429	430			.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure				.	.														.																																						.	.	.	.	.
Query SS confidence				.	.														.																																						.	.	.	.	.
Query Sequence		S	E	.	.	D	E	F	F	Q	E	A	Q	T	M	M	K	L	.	S	H	P	K	L	V	K	F	Y	G	V	C	S	K	K	Y	P	I	Y	I	V	T	E	Y	I	T	N	G	C	L	L	N	Y	L	K	S	H	.	.	.	.	.
Query Conservation				.	.														.																																						.	.	.	.	.
Alig confidence				.	.														.																																						.	.	.	.	.
Template Conservation
Template Sequence		L	T	E	R	E	A	L	M	S	E	L	K	V	L	S	Y	L	G	N	H	M	N	I	V	N	L	L	G	A	C	T	I	G	G	P	T	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I
Template Known Secondary structure																						T	T	B									S	S	S	S									T	T		B									G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
														481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	K	G	L	E	S	C	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	D	S	D	L	S	V	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	S	K	T	S	P	A	I	M	E	D	D	E	L	A	L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T	H	G	R	I	T	K	I
Template Known Secondary structure			S	S	S					B	T	T	B																										T	T				S			S	G	G	G					T	T	T
Template Predicted Secondary structure
Template SS confidence
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		S	D	F	G	M	T	R	Y	V	L	D	D	Q	Y	V	S	S	V	G	T	K	F	.	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	Y	S	S	K	S	D	V	W	A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		C	D	F	G	L	A	R	D	I	K	N	D	S	N	Y	V	V	K	G	N	A	R	L	P	V	K	W	M	A	P	E	S	I	F	N	C	V	Y	T	F	E	S	D	V	W	S	Y	G	I	F	L	W	E	L	F	S	L	G	S	S
Template Known Secondary structure					G	G	G			G	G	G		T	T	S				T	T					G	G	G	S								T																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.
		588	.	590	.	.	.		.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		P	Y	D	L	Y	D	.	N	S	E	V	V	V	K	V	S	Q	G	H	R	L	Y	R	P	Q	L	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S	A	I	E	P	L	R
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		P	Y	P	G	M	P	V	D	S	K	F	Y	K	M	I	K	E	G	F	R	M	L	S	P	E	H	A	P	A	E	M	Y	D	I	M	K	T	C	W	D	A	D	P	L	K	R	P	T	F	K	Q	I	V	Q	L	I	E	K	Q	I
Template Known Secondary structure		S	S	T	T				S									T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		869	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.
		647	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		929	930	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D