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Job DescriptionP97504
Confidence99.97%DateWed Jul 10 14:16:15 BST 2013
Rank321Aligned Residues185
% Identity16%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   396...400.........410.........420.... .....430.........440......
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Query Sequence  LKELGNGQFGVVQLGQWKGQYDVAVKMIK. . . . . . . . . EGAMSEDEFFQEAQTMMKLSHP
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Template Sequence  VEVNWIGAEADIKRDSY. LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF
Template Known Secondary structure  S






S.TT


TTS
GGGT
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   319320.........330..... ....340.........350.........360.........370.......
 
   447..450.........460.........470.........480.........490.........500......
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Query Sequence  KLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESH
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Template Sequence  GIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . LDIAYKIGEIVGKLHKN
Template Known Secondary structure  T




TTTT


SGGGTTTT
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   395....400.........410.........420........ .430.........440.....
 
   507..510.........520.........530.........540.........550.........560......
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Query Sequence  QFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS
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Template Sequence  DVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDEDKAVD. . . . . . LIVFKKAVLSTHHE
Template Known Secondary structure  T
S


GGG..SSS


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   446...450......... 460.........470.........480... ......490.......
 
   567..570.........580.........590.........600...
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Query Sequence  SKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQ
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Template Sequence  KFDEIWERFLEGYKSVY. DRWE. . . . IILELMKDVER
Template Known Secondary structure  T
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   498.500.........510.... .... .520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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