Job Description P97504 Confidence 100.00% Date Wed Jul 10 14:16:15 BST 2013 Rank 314 Aligned Residues 233 % Identity 18% Template c3e3pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein kinase, putative glycogen synthase PDBTitle: glycogen synthase kinase from leishmania major Resolution 2.00 Å

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		406	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure										.																																																.	.	.	.
Query SS confidence										.																																																.	.	.	.
Query Sequence		V	V	Q	L	G	Q	W	K	.	G	Q	Y	D	V	A	V	K	M	I	K	E	G	A	M	S	E	D	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	S	K	K	Y	P	.	.	.	.
Query Conservation										.																																																.	.	.	.
Alig confidence										.																																																.	.	.	.
Template Conservation
Template Sequence		T	V	Q	L	G	K	E	K	S	T	G	M	S	V	A	I	K	K	V	I	Q	D	P	R	F	R	N	R	E	L	Q	I	M	Q	D	L	A	V	L	H	H	P	N	I	V	Q	L	Q	S	Y	F	Y	T	L	G	E	R	D	R	R
Template Known Secondary structure									T	T	T													T	T																		T	T	B												S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
					461	.	.	.	.	.	.	.	.	470	.	.	.	.			.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure		.	.	.															.	.
Query SS confidence		.	.	.															.	.
Query Sequence		.	.	.	I	Y	I	V	T	E	Y	I	T	N	G	C	L	L	.	.	N	Y	L	K	S	H	G	K	G	L	E	S	C	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A
Query Conservation		.	.	.															.	.
Alig confidence		.	.	.															.	.
Template Conservation
Template Sequence		D	I	Y	L	N	V	V	M	E	Y	V	P	D	T	L	H	R	C	C	R	N	Y	Y	R	R	Q	V	A	P	P	P	I	L	I	K	V	F	L	F	Q	L	I	R	S	I	G	C	L	H	L	P	S	V	N	V	C	H	R	D	I
Template Known Secondary structure													S		B											T	T																							T	S	T	T	T			B		S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		516	.	.	.	520				.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		R	N	C	L	V	.	.	.	D	S	D	L	S	V	K	V	S	D	F	G	M	T	R	Y	V	L	D	D	Q	Y	V	S	S	V	G	T	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	Y	S	S	K	S	D	V	W
Query Conservation							.	.	.
Alig confidence							.	.	.																																	.
Template Conservation																																										.
Template Sequence		K	P	H	N	V	L	V	N	E	A	D	G	T	L	K	L	C	D	F	G	S	A	K	K	L	S	P	S	E	P	N	V	A	Y	I	C	S	R	Y	Y	.	R	A	P	E	L	I	F	G	N	Q	H	Y	T	T	A	V	D	I	W
Template Known Secondary structure			G	G	G					T	T	T	T							G	G	G		B				T	T	S				S	T	T	S		G	G	G	.							T	T		S	S			T
Template Predicted Secondary structure																																										.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	S	E	V	V	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		S	V	G	C	I	F	A	E	M	M	L	.	G	E	P	I	F	R	G	D	N	S	A	G	Q	L	H	E	I	V	R	V	L	G	C	P	S	R	E	V	L	R	K	L	N	P	S	H	T	D	V	D	L	Y	N	S	K	G	I	P
Template Known Secondary structure													.	S	S		S	S			S	S														S											T	T				G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	G	H	R	L	Y	R	P	Q	L	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	S	N	V	F	S	D	H	S	L	K	D	A	K	E	A	Y	D	L	L	S	A	L	L	Q	Y	L	P	E	E	R	M	K	P	Y	E	A	L	C
Template Known Secondary structure						T		T	T			S	S												S		S	S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D