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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank186Aligned Residues234
% Identity27%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410.........420.... .....430.........440.........450
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Query Sequence  LLKELGNGQFGVVQLGQWKGQYDVAVKMIK. . . . EGAMSEDEFFQEAQTMMKLSHPKLVK
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Template Sequence  YQRVKKLGSYGEVLLCKDKTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK
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   23......30.........40.........50.........60.........70.........80..
 
   451........460.........470.........480.........490.........500.........510
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Query Sequence  FYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESHQFIH
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Template Sequence  LYEFFEDKRNYYLVMEVYRGGELFDEIILRQK. FSEVDAAVIMKQVLSGTTYLHKHNIVH
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SS


S
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   86...90.........100.........110....... ..120.........130.........140....
 
   511........520.. .......530.........540.........550.........560........
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Query Sequence  RDLAARNCLVDS. . DLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK
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Template Sequence  RDLKPENLLLESKSDALIKIVDFGLS. . . . . . . . . AHFERLGTAYYIAPEVLR. KKYDEK
Template Known Secondary structure  S


GGGSS





STT
T.........TT

TTT
TTT

T.T


T
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   145....150.........160.........170 .........180........ .190....
 
   569570.........580.........590.........600.... .....610.........620.....
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Query Sequence  SDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQG. . . HRLYRPQLASDTIYQIMYSCW
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Template Sequence  CDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML
Template Known Secondary structure  .SS
SS

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TTTTTTS
T
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   203......210....... ..220.........230.........240.........250.........260.
 
   626...630.........640
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Query Sequence  HELPEKRPTFQQLLS
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Template Sequence  TYEPSKRISAEEALN
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S
TTTS

T
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   262.......270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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